Job Description P42684 Confidence 99.51% Date Thu Apr 26 09:29:57 BST 2012 Rank 370 Aligned Residues 70 % Identity 23% Template c1mv3A_ PDB info PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:myc box dependent interacting protein 1; PDBTitle: nmr structure of the tumor suppressor bin1: alternative2 splicing in melanoma and interaction with c-myc Resolution UNK

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		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140					.	.	.	.	.	.	.	.											.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																															.	.	.	.									.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.									.	.	.	.	.	.	.	.	.	.
Query Sequence		S	S	K	E	N	L	L	G	A	T	E	S	D	P	N	L	F	V	A	L	Y	D	F	V	A	S	G	D	N	T	L	S	I	T	K	G	E	K	L	R	V	L	G	Y	N	.	.	.	.	Q	N	G	E	W	S	E	V	.	.	.	.	.	.	.	.	.	.	R	S	K	N	G	Q	G	W	V	P	S	N	Y
Query Conservation																																															.	.	.	.									.	.	.	.	.	.	.	.	.	.
Alig confidence																																															.	.	.	.									.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	S	G	A	G	R	L	D	L	P	P	G	F	M	F	K	V	Q	A	Q	H	D	Y	T	A	T	D	T	D	E	L	Q	L	K	A	G	D	V	V	L	V	I	P	F	Q	N	P	E	E	Q	D	E	G	W	L	M	G	V	K	E	S	D	W	N	Q	H	K	K	L	E	K	C	R	G	V	F	P	E	N	F
Template Known Secondary structure								S	S			T	T								S	S		B				S	T	T				B		S	S									S		G	G	G	S		T	T												T	G	G	G	G	G	G	T						S	T	T
Template Predicted Secondary structure
Template SS confidence
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
		162	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	P	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	E	R	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		478	.	480	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions