 |
| Job Description | Q96PG8 | | Confidence | 4.84% | Date | Wed May 9 17:36:55 BST 2012 |
| Rank | 39 | Aligned Residues | 27 |
| % Identity | 22% | Template | c3ckpB_ |
| PDB info |
PDB header:hydrolase | Chain: B: PDB Molecule:beta-secretase 1; |
PDBTitle: crystal structure of bace-1 in complex with inhibitor
|
| Resolution | 2.30 Å |
|
|   |   |
3 | . | . | . | . | |
. | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
| Query SS confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
F | G | M | G | S | . |
A | Q | A | C | P | C | Q | V | P | R | A | A | S | T | T | W | V | P | C | Q | I | C |
| Query Conservation |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Alig confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |
|
|
|
|   |
|   |   |   |
|   |   |
|
|
|
|   |   |   |
|
|   |   |   |   |
|
| Template Sequence |   |
M | T | V | G | S | P | P | Q | T | L | N | I | L | V | D | T | G | S | S | N | F | A | V | G | A | A | P | H |
| Template Known Secondary structure |   |
 |  |  | T | T | T | T |  |  |  |  |  |  |  |  | T | T |
|
|
|  |  |  |  |
| S |
|
|
| Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
18 | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|