Return to main results Retrieve Phyre Job Id

Job DescriptionQ96A56
Confidence6.11%DateFri May 25 09:58:32 BST 2012
Rank35Aligned Residues27
% Identity26%Templatec3h7nD_
PDB info PDB header:structural proteinChain: D: PDB Molecule:nucleoporin nup120; PDBTitle: structure of nup120
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20.........30.........
Predicted Secondary structure 




















Query SS confidence 


























Query Sequence  VSSSSNQEPEFNEKEDDEWILVDFIDT
Query Conservation                


 




    
Alig confidence 


























Template Conservation 
          
  
  
 



 
  
Template Sequence  PNASMNQRYTLTIQEVEQQLLVNVILK
Template Known Secondary structure  SS
BSSGGGG

SS
BT
Template Predicted Secondary structure 











Template SS confidence 


























   98.100.........110.........120....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions