Job Description A1X283 Confidence 28.24% Date Thu Apr 26 09:27:51 BST 2012 Rank 311 Aligned Residues 59 % Identity 22% Template d2fufa1 SCOP info Origin of replication-binding domain, RBD-like Origin of replication-binding domain, RBD-like The origin DNA-binding domain of SV40 T-antigen Resolution 1.45

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	E	A	I	Y	R	R	Y	S	K	F	F	D	L	Q	M	Q	M	L	D	K	F	P	M	E	G	G	Q	K	D	P	K	Q	R	I	I	P	F	L	P	G	K	I	L	F	R	R	S	H	I	R	D	V	A	V	K	R	L	I	P	I	D	E	Y	C	K	A	L
Query Conservation
Alig confidence																										.	.	.	.	.																								.	.	.	.	.
Template Conservation																										.	.	.	.	.																								.	.	.	.	.
Template Sequence		A	C	F	A	I	Y	T	T	K	E	K	A	A	L	L	Y	K	K	I	X	E	K	Y	S	.	.	.	.	.	V	T	F	I	S	R	H	N	S	Y	N	H	N	I	L	F	F	L	T	P	H	R	H	.	.	.	.	.	R	V	S	A	I	N	N	Y	A	Q	K	L
Template Known Secondary structure																								T	T	.	.	.	.	.		S								T	T													.	.	.	.	.
Template Predicted Secondary structure																										.	.	.	.	.																								.	.	.	.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180						.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.						.	.	.	.	.	.	210	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions