Job Description A1X283 Confidence 99.39% Date Thu Apr 26 09:27:51 BST 2012 Rank 195 Aligned Residues 53 % Identity 40% Template c3rebD_ PDB info PDB header:protein binding Chain: D: PDB Molecule:tyrosine-protein kinase hck; PDBTitle: hiv-1 nef protein in complex with engineered hck-sh3 domain Resolution 3.45 Å

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		854	.	.	.	.	.	860	.	.	.	.	.	.		.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		L	Y	V	A	V	A	D	F	E	G	D	K	D	.	T	S	S	F	Q	E	G	T	V	F	E	V	R	E	K	N	S	S	G	W	W	F	C	Q	V	L	S	G	A	P	S	W	E	G	W	I	P	S	N	Y	L	R	K
Query Conservation															.
Alig confidence															.																.														.	.
Template Conservation																															.														.	.
Template Sequence		I	V	V	A	L	Y	D	Y	V	S	W	S	P	D	D	L	S	F	Q	K	G	D	Q	M	V	V	L	E	E	.	S	G	E	W	W	K	A	R	S	L	A	T	R	.	.	K	E	G	Y	I	P	S	N	Y	V	A	R
Template Known Secondary structure						S	S		B			S	S	T	T	B			B		T	T									.	S	S	S							T	T	T		.	.							G	G	G
Template Predicted Secondary structure																															.														.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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