Job Description A1X283 Confidence 90.24% Date Thu Apr 26 09:27:51 BST 2012
Rank 254 Aligned Residues 116
% Identity 19% Template c3m1uB_
PDB info
PDB header: hydrolaseChain: B: PDB Molecule: putative gamma-d-glutamyl-l-diamino acid endopeptidase;
PDBTitle: crystal structure of a putative gamma-d-glutamyl-l-diamino acid2 endopeptidase (dvu_0896) from desulfovibrio vulgaris hildenborough at3 1.75 a resolution
Resolution 1.75 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
172 . . . . . . . 180 . . . . . . . .
. 190 . . . . . . . . . 200 . . . . . . . . . 210 . . . . . . . . . 220 . . . . . . . . . 230 .
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Predicted Secondary structure  
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Query SS confidence  
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Query Sequence  
S L S V G Q V V D I I E K N E S G .
W W F V S T A E E Q G W V P A T C L E G Q D G V Q D E F S L Q P E E E E K Y T V I Y P .
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Y T A R D Q D E M N L E R G A
Query Conservation  
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Alig confidence  
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Template Conservation  
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Template Sequence  
A V W X G T P V F V G H A T A D R A W L Y V E T A F A A G W X P A A D V A R V D D A F X T R .
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Y E S G S L A A I L R D D T S L N G A D G T H L A T A H I G T
Template Known Secondary structure  
T T T T S S S S G G G . . . S S S T T T T S T T
Template Predicted Secondary structure  
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Template SS confidence  
   
185 . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210 . . . . . . . . . 220 . . . . . . . . . 230
. . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 .
 
   
247 . . 250 . . . . . . . . .
260 . . . . . . . . . 270 . . . . . . . . . 280 . . . . . . . . . 290
Predicted Secondary structure  
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Query SS confidence  
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Query Sequence  
V V E V I Q K N L E G W W .
K I R Y Q G K E G W A P A S Y L K K N S G E P L P P K P G P G
Query Conservation  
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Alig confidence  
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Template Conservation  
                                                       
Template Sequence  
V L P L S G A S Q V G R T V L V P V R A P E G H A V V V P V L L T S G E A A Q K P V P L T
Template Known Secondary structure  
S S T T S B T T T S S
Template Predicted Secondary structure  
Template SS confidence  
   
262 . . . . . . . 270 . . . . . . . . . 280 . . . . . . . . . 290 . . . . . . . . . 300 . . . . . .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]