 |
| Job Description | A1X283 | | Confidence | 99.44% | Date | Thu Apr 26 09:27:51 BST 2012 |
| Rank | 166 | Aligned Residues | 59 |
| % Identity | 25% | Template | c2csiA_ |
| PDB info |
PDB header:endocytosis/exocytosis | Chain: A: PDB Molecule:rim binding protein 2; |
PDBTitle: solution structure of the third sh3 domain of human rim-2 binding protein 2
|
| Resolution | UNK |
|
 |
|   |   |
156 | . | . | . | 160 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | |
. | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . |
| Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
| . |
|
|
|  |  |  |  |  |
|
|  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
Q | Y | V | V | V | A | N | Y | Q | K | Q | E | S | S | . |
. |
. |
. |
. |
. |
. |
E | I | S | L | S | V | G | Q | V | V | D | I | I | E | K | N | E | . |
S | G | W | W | F | V | S | T | A | E | E | Q | G | W | V | P | A | T | C | L | E | G | Q | D | G | V | Q | D |
| Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . |
|
|   |   |   |   |
|
|   |
|   |
|   |   |   |   |   | . |   |
|
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |   |
|
|   |
|   |
|   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |
|   |   |
|   |
|
|   |   |
|
|
|   |   |   |   |   |   |
|
| Template Sequence |   |
R | M | V | A | L | Y | D | Y | D | P | R | E | S | S | P | N | V | D | V | E | A | E | L | T | F | C | T | G | D | I | I | T | V | F | G | E | I | D | E | D | G | F | Y | Y | G | E | L | N | G | Q | K | G | L | V | P | S | N | F | L | E | E | V | S | G | P | S | S |
| Template Known Secondary structure |   |
 |  |  |
| S | S |
|
|
| T | T | T | T | S |
| S | S | S | T | T | T | S |
|
|
|
| T | T |
|  |  |  |  |  | S | S |
|
| S | S | S |  |  |  |  |  |  | T | T |  |  |  |  |  |  | G | G | G |
|
| B |
|
|
|
|
|
|
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|