Return to main results Retrieve Phyre Job Id

Job DescriptionA0AVI4
Confidence95.33%DateFri May 25 09:55:06 BST 2012
Rank4Aligned Residues56
% Identity14%Templated1vyxa_
SCOP infoRING/U-box RING/U-box Variant RING domain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   278.280.........290.........300.........310.........320.........330.........340.........350...
Predicted Secondary structure 



















































Query SS confidence 











































































Query Sequence  SSQELEACIGCMQTRASVKLVKTCQEAATGECQQCYCRPMWCLTCMGKWFASRQDPLRPDTWLASRVPCPTCRARF
Query Conservation     
 
 




    



 
 
       
  








 











   






  





 
Alig confidence 














.........




























...........











Template Conservation 
 

   
 

    .........      

 
  
    
  

  
    ...........    

 

   
Template Sequence  EDEDVPVCWICNEEL. . . . . . . . . GNERFRACGCTGELENVHRSCLSTWLTIS. . . . . . . . . . . RNTACQICGVVY
Template Known Secondary structure  TT
S

TTTT
.........S




S


SSGGGS

...........T
SB
TTT

B
Template Predicted Secondary structure 









.........









...........









Template SS confidence 











































































   2.......10...... ...20.........30.........40..... ....50.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions