Job Description A0AVI4 Confidence 89.15% Date Fri May 25 09:55:06 BST 2012 Rank 25 Aligned Residues 55 % Identity 31% Template c3l11A_ PDB info PDB header:ligase Chain: A: PDB Molecule:e3 ubiquitin-protein ligase rnf168; PDBTitle: crystal structure of the ring domain of rnf168 Resolution 2.12 Å

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		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	Y	S	V	P	S	S	Q	E	L	E	A	C	I	G	C	M	Q	T	R	A	S	V	K	L	V	K	T	C	Q	E	A	A	T	G	E	C	Q	Q	C	Y	C	R	P	M	W	C	L	T	C	M	G	K	W	F	A	S	R	Q	D	P	L	R	P	D	T	W	L	A	S	R	V	P	C	P	T	C	R	A
Query Conservation
Alig confidence													.												.	.	.	.	.	.	.	.	.													.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.												.	.	.	.	.	.	.	.	.													.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	K	D	A	I	P	S	L	S	E	C	.	Q	C	G	I	C	M	E	I	L	V	E	.	.	.	.	.	.	.	.	.	P	V	T	L	P	C	N	H	T	L	C	K	.	.	.	.	.	P	C	F	Q	S	T	V	.	.	.	.	.	.	.	.	.	.	.	.	E	K	A	S	L	C	C	P	F	C	R	R
Template Known Secondary structure			T	T									.	B		T	T	T		S	B		S	S	.	.	.	.	.	.	.	.	.					T	T	S						.	.	.	.	.							T	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T	T	S	B		T	T	T
Template Predicted Secondary structure													.												.	.	.	.	.	.	.	.	.													.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.										.	.	.	.	30	.	.	.	.	.	.	.						.	.	40	.	.	.	.													.	.	.	.	.	50	.	.	.	.	.	.
		352	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	V
Template Known Secondary structure		B
Template Predicted Secondary structure
Template SS confidence
		57	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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