Job Description A0AVI4 Confidence 64.49% Date Fri May 25 09:55:06 BST 2012 Rank 55 Aligned Residues 44 % Identity 34% Template c2yhoE_ PDB info PDB header:ligase Chain: E: PDB Molecule:e3 ubiquitin-protein ligase mylip; PDBTitle: the idol-ube2d complex mediates sterol-dependent degradation of the2 ldl receptor Resolution 2.10 Å

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		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	L	E	A	C	I	G	C	M	Q	T	R	A	S	V	K	L	V	K	T	C	Q	E	A	A	T	G	E	C	Q	Q	C	Y	C	R	P	M	W	C	L	T	C	M	G	K	W	F	A	S	R	Q	D	P	L	R	P	D	T	W	L	A	S	R	V	P	C	P	T	C	R	A	R	F
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	E	A	M	L	C	M	V	C	C	E	E	E	I	N	S	T	F	C	P	C	.	.	.	.	.	.	.	.	.	.	.	.	.	G	H	T	V	C	C	E	S	C	A	A	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	S	C	P	V	C	R	S	R	V
Template Known Secondary structure					T	B		T	T	T	S	S	S	B							T	T	.	.	.	.	.	.	.	.	.	.	.	.	.					B						T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	B		T	T	T			B
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.														.	.	.	.	.	.	.	410	.	.	.	.	.																		.	.	.	.	420	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions