Job Description A0AVI4 Confidence 83.16% Date Fri May 25 09:55:06 BST 2012 Rank 39 Aligned Residues 45 % Identity 29% Template c2y43B_ PDB info PDB header:ligase Chain: B: PDB Molecule:e3 ubiquitin-protein ligase rad18; PDBTitle: rad18 ubiquitin ligase ring domain structure Resolution 1.80 Å

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		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	Q	E	A	A	T	G	E	C	Q	Q	C	Y	C	R	P	M	W	C	L	T	C	M	G	K	W	F	A	S	R	Q	D	P	L	R	P	D	T	W	L	A	S	R	V	P	C	P	T	C	R	A	R	F	C	I	L	D	V
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	F	E	Y	F	N	I	A	M	I	I	P	Q	C	S	H	N	Y	C	S	L	C	I	R	K	F	L	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Y	K	T	Q	C	P	T	C	C	V	T	V	T	E	P	D	L
Template Known Secondary structure		T		S	B		S	S					T	T	T														.	.	.	.	.	.	.	.	.	.	.	.	.	T	T		S	B		T	T	T			B			G	G	G
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.														.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions