Job Description A0AVI4 Confidence 34.07% Date Fri May 25 09:55:06 BST 2012 Rank 69 Aligned Residues 42 % Identity 21% Template c2l5uA_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:chromodomain-helicase-dna-binding protein 4; PDBTitle: structure of the first phd finger (phd1) from chd4 (mi2b) Resolution UNK

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		302	.	.	.	.	.	.	.	310	.	.	.											.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	E	A	A	T	G	E	C	Q	Q	C	Y	.	.	.	.	.	.	.	.	.	.	C	R	P	M	W	C	L	T	C	M	G	K	W	F	A	S	R	Q	D	P	L	R	P	D	T	W	L	A	S	R	V	P	C	P	T	C	R	A	R
Query Conservation														.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.															.	.	.	.										.	.	.	.	.
Template Conservation																																						.	.	.	.										.	.	.	.	.
Template Sequence		E	T	D	H	Q	D	Y	C	E	V	C	Q	Q	G	G	E	I	I	L	C	D	T	C	P	R	A	Y	H	M	V	C	L	D	P	D	M	.	.	.	.	E	K	A	P	E	G	K	W	S	.	.	.	.	.	C	P	H	C	E	K	E
Template Known Secondary structure		S	S				S	S		T	T	T	S			S	S					S	S	S	S										T	T		.	.	.	.		S				S	S			.	.	.	.	.		T	T	G	G	G	G
Template Predicted Secondary structure																																						.	.	.	.										.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.					.	.	.	.	.	.	.	50	.						.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions