Return to main results Retrieve Phyre Job Id

Job DescriptionA0AVI4
Confidence92.05%DateFri May 25 09:55:06 BST 2012
Rank17Aligned Residues56
% Identity20%Templatec2kizA_
PDB info PDB header:metal binding proteinChain: A: PDB Molecule:e3 ubiquitin-protein ligase arkadia; PDBTitle: solution structure of arkadia ring-h2 finger domain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   278.280.........290.........300.........310.........320.........330.........340.........350.......
Predicted Secondary structure 



















































Query SS confidence 















































































Query Sequence  SSQELEACIGCMQTRASVKLVKTCQEAATGECQQCYCRPMWCLTCMGKWFASRQDPLRPDTWLASRVPCPTCRARFCILD
Query Conservation     
 
 




    



 
 
       
  








 











   






  





 




Alig confidence 
















...........

























.............












Template Conservation         
 



    ...........        
 
 

  

  
     ............. 

 

  
    
Template Sequence  EEDTEEKCTICLSILEE. . . . . . . . . . . GEDVRRLPCMHLFHQVCVDQWLITNK. . . . . . . . . . . . . KCPICRVDIEAQL
Template Known Secondary structure  STT


SBTTTTB


S...........SS

TTS

S.............B
TTT
SBS
S

Template Predicted Secondary structure 











...........









.............












Template SS confidence 















































































   10.........20...... ...30.........40.........50.. .......60.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions