Job Description A0AVI4 Confidence 89.29% Date Fri May 25 09:55:06 BST 2012 Rank 24 Aligned Residues 54 % Identity 30% Template c2hdpB_ PDB info PDB header:ligase Chain: B: PDB Molecule:ubiquitin-protein ligase e3 mdm2; PDBTitle: solution structure of hdm2 ring finger domain Resolution UNK

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		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	P	S	S	Q	E	L	E	A	C	I	G	C	M	Q	T	R	A	S	V	K	L	V	K	T	C	Q	E	A	A	T	G	E	C	Q	Q	C	Y	C	R	P	M	W	C	L	T	C	M	G	K	W	F	A	S	R	Q	D	P	L	R	P	D	T	W	L	A	S	R	V	P	C	P	T	C	R	A	R	F
Query Conservation
Alig confidence									.																		.	.	.	.	.	.	.									.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.																		.	.	.	.	.	.	.									.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	L	P	L	N	A	I	.	E	P	C	V	I	C	Q	G	R	P	K	N	G	C	I	V	H	.	.	.	.	.	.	.	G	K	T	G	H	L	M	A	.	.	.	.	C	F	T	C	A	K	K	L	K	K	R	N	K	.	.	.	.	.	.	.	.	.	.	.	.	.	P	C	P	V	C	R	Q	P	I
Template Known Secondary structure				S	S	S			.		B		S	S	S		S	S	B	S							.	.	.	.	.	.	.	T	T					S		.	.	.	.											T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	B		T	T	T			B
Template Predicted Secondary structure									.																		.	.	.	.	.	.	.									.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		429	430	.	.	.	.	.		.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.								.	.	.	.	.	.	.	460					.	.	.	.	.	.	.	.	.	470	.	.	.														.	.	.	.	.	.	480	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions