 |
| Job Description | A0AVI4 | | Confidence | 78.84% | Date | Fri May 25 09:55:06 BST 2012 |
| Rank | 45 | Aligned Residues | 33 |
| % Identity | 30% | Template | c2ecyA_ |
| PDB info |
PDB header:apoptosis | Chain: A: PDB Molecule:tnf receptor-associated factor 3; |
PDBTitle: solution structure of the zinc finger, c3hc4 type (ring2 finger)" domain of tnf receptor-associated factor 3
|
| Resolution | UNK |
|
|   |   |
314 | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
C | R | P | M | W | C | L | T | C | M | G | K | W | F | A | S | R | Q | D | P | L | R | P | D | T | W | L | A | S | R | V | P | C | P | T | C | R | A | R | F | C | I | L | D | V |
| Query Conservation |   |
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|   |   |   |
|
|
|
|
|
|
|   |   |
|
|
|
|
|
|   |
|
|
|
|
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |   |
|
|   |
|
|   |   |
|   |   |   |   |
|
| Template Sequence |   |
C | G | H | R | F | C | E | S | C | M | A | A | L | L | S | S | S | S | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | C | T | A | C | Q | E | S | I | V | K | D | K | V |
| Template Known Secondary structure |   |
S | S |
|
|
|
|  |  |  |  |  |  |  |  | T | T | S | S |
| . | . | . | . | . | . | . | . | . | . | . | . |
|
| T | T | T |
|
|
|
|
| T | T | T |
|
| Template Predicted Secondary structure |   |
|
|
|  |  |
|  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|  |  |  |
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
33 | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 60 | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|