Job Description A0AVI4 Confidence 71.62% Date Fri May 25 09:55:06 BST 2012 Rank 49 Aligned Residues 40 % Identity 20% Template c1rmdA_ PDB info PDB header:dna-binding protein Chain: A: PDB Molecule:rag1; PDBTitle: rag1 dimerization domain Resolution 2.10 Å

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		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	Q	E	A	A	T	G	E	C	Q	Q	C	Y	C	R	P	M	W	C	L	T	C	M	G	K	W	F	A	S	R	Q	D	P	L	R	P	D	T	W	L	A	S	R	V	P	C	P	T	C	R	A	R	F
Query Conservation
Alig confidence												.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	E	H	I	L	A	D	P	V	E	.	T	S	C	K	H	L	F	C	R	I	C	I	L	R	C	L	K	V	.	.	.	.	.	.	.	.	.	.	.	.	M	G	S	Y	C	P	S	C	R	Y	P	C
Template Known Secondary structure		T		S	B		S	S				.		T	T	S															.	.	.	.	.	.	.	.	.	.	.	.	T		S	B		T	T	T			B
Template Predicted Secondary structure												.																			.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.													.	.	.	60	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions