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Job DescriptionP09769
Confidence100.00%DateFri May 25 09:50:58 BST 2012
Rank49Aligned Residues234
% Identity27%Templatec3q5iA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase; PDBTitle: crystal structure of pbanka_031420
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   269270.........280.. .......290.........300.........310.........320......... 330.........340......
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Query Sequence  LGTGCFGDVWLGTW. NGSTKVAVKTLKPGTMSPKAFLEEAQVMKLLRHDKLVQLYAVVSEEP. IYIVTEFMCHGSLLDFL
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Template Sequence  RKLGSYGEVLLCKEKNGHSEKAIKVIKKK. . FHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQI
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TTT



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   61........70.........80......... 90.........100.........110.........120.........130........
 
   347..350.........360.........370.........380.........390 .........400.........410.........420...
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Query Sequence  KNPEGQDLRLPQLVDMAAQVAEGMAYMERMNYIHRDLRAANILV. . . GERLACKIADFGLARLIKDDEYNPCQGSKFPIK
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Template Sequence  INRH. . KFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDR. . LGTAY
Template Known Secondary structure  S..


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   157..160 .........170.........180.........190.........200.........210.........220....... ..230..
 
   424.....430.........440.........450.........460.........470.........480. ........490.........500
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Query Sequence  WTAPEAALFGRFTIKSDVWSFGILLTELITKGRIPYPGMNKREVLEQVEQGYHMPCPP. . . GCPASLYEAMEQTWRLDPE
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Template Sequence  YIAPEVLKK. KYNEKCDVWSCGVIMYILLC. GYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYN
Template Known Secondary structure  T

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   233......240. ........250.........260. ........270.........280.........290.........300.........310
 
   501........510
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Query Sequence  ERPTFEYLQS
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Template Sequence  KRCTAEEALN
Template Known Secondary structure  TS

T
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   311........320
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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