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Job DescriptionP09769
Confidence100.00%DateFri May 25 09:50:58 BST 2012
Rank258Aligned Residues236
% Identity25%Templatec3n9xA_
PDB info PDB header:transferaseChain: A: PDB Molecule:phosphotransferase; PDBTitle: crystal structure of map kinase from plasmodium berghei, pb000659.00.0
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   261........270.........280... ......290.........300.. .......310.........320....... ..330
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Query Sequence  SSITLERRLGTGCFGDVWLGTWN. GSTKVAVKTLKPGTMSPKA. . . FLEEAQVMKLLRHDKLVQLYAVVSE. . . . . . EPI
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Template Sequence  DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDEL
Template Known Secondary structure  TTTTTTTT
STTTS


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   26...30.........40.........50.........60.........70.........80.........90.........100.....
 
   331........340.........350.........360.........370.........380.........390.........400.........410
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Query Sequence  YIVTEFMCHGSLLDFLKNPEGQDLRLPQLVDMAAQVAEGMAYMERMNYIHRDLRAANILVGERLACKIADFGLARLIKDD
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Template Sequence  YIVLEIADSDLKKLFK. . . TPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLAR. . . . .
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   106...110.........120. ........130.........140.........150.........160.........170.......
 
   411........420.........430.... .....440.........450.........460...
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Query Sequence  EYNPCQGSKFPIKWTAPEAALFGR. FTIKSDVWSFGILLTELITKGRIPYPGMN. . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  . . . . . TIHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN. MLQSHINDPTNRFPLFPGSSCFPHEKSNRDQLNII
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   178.180.........190.........200.........210...... ...220.........230.........240.........250.
 
   464.....470........ .480.........490.........500.........510
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Query Sequence  . . . . . . . . . . . . . . . . . . . KREVLEQVEQGYHMP. . . CPPGCPASLYEAMEQTWRLDPEERPTFEYLQS
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Template Sequence  FNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALD
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   293......300.........310.........320.........330.........340.........350.........360.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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