Phyre 2 alignment of P09769 with c3mdyC

Job Description P09769
Confidence 100.00% Date Fri May 25 09:50:58 BST 2012

Rank 168 Aligned Residues 278

% Identity 26% Template c3mdyC_

PDB info PDB header:transferase/isomerase Chain: C: PDB Molecule:bone morphogenetic protein receptor type-1b; PDBTitle: crystal structure of the cytoplasmic domain of the bone morphogenetic2 protein receptor type-1b (bmpr1b) in complex with fkbp12 and ldn-3 193189

Resolution 2.05 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	S	V	Q	E	L	V	Q	H	Y	M	E	V	N	D	G	L	C	N	L	L	I	A	P	C	T	I	M	K	P	Q	T	L	G	L	A	K	D	A	W	E	I	S	R	S	S	I	T	L	E	R	R	L	G	T	G	C	F	G	D	V	W	L	G	T	W	N	G	S	T	K	V	A	V	K	T	L	K	P	G	T
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template Sequence	S	L	R	D	L	I	E	Q	S	Q	S	S	G	S	G	S	G	L	P	L	L	V	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	T	I	A	K	Q	I	Q	M	V	K	Q	I	G	K	G	R	Y	G	E	V	W	M	G	K	W	R	G	E	.	K	V	A	V	K	V	F	F	T	T	E
Template Known Secondary structure														S		S	S	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T															T	T									T	T		.									G	G	G
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template SS confidence
	175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.																	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.

	298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.						.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure																												.	.	.	.	.
Query SS confidence																												.	.	.	.	.
Query Sequence	M	S	P	K	A	F	L	E	E	A	Q	V	M	K	L	L	R	H	D	K	L	V	Q	L	Y	A	V	.	.	.	.	.	V	S	E	E	P	I	Y	I	V	T	E	F	M	C	H	G	S	L	L	D	F	L	K	N	P	E	G	Q	D	L	R	L	P	Q	L	V	D	M	A	A	Q	V	A	E	G	M	A	Y
Query Conservation																												.	.	.	.	.
Alig confidence																												.	.	.	.	.																											.	.	.
Template Conservation																																																											.	.	.
Template Sequence	E	A	S	W	F	R	E	T	E	I	Y	Q	T	V	L	M	R	H	E	N	I	L	G	F	I	A	A	D	I	K	G	T	G	S	W	T	Q	L	Y	L	I	T	D	Y	H	E	N	G	S	L	Y	D	Y	L	K	S	T	T	.	.	.	L	D	A	K	S	M	L	K	L	A	Y	S	S	V	S	G	L	C	H
Template Known Secondary structure												T	S	T	T				T	T	B										S		G	G	G											T	T		B										.	.	.	B
Template Predicted Secondary structure																																																											.	.	.
Template SS confidence
	238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.				.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.

	373	.	.	.									.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.							.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.																																																										.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.																																																										.	.	.	.	.	.
Query Sequence	M	E	R	M	.	.	.	.	.	.	.	.	N	Y	I	H	R	D	L	R	A	A	N	I	L	V	G	E	R	L	A	C	K	I	A	D	F	G	L	A	R	L	I	K	D	D	E	Y	N	P	C	Q	G	S	K	F	P	I	K	W	T	A	P	E	A	A	L	F	G	.	.	.	.	.	.	R	F	T	I	K
Query Conservation					.	.	.	.	.	.	.	.																																																										.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.																																												.	.	.	.											.	.	.	.	.	.
Template Conservation																																																								.	.	.	.
Template Sequence	L	H	T	E	I	F	S	T	Q	G	K	P	A	I	A	H	R	D	L	K	S	K	N	I	L	V	K	K	N	G	T	C	C	I	A	D	L	G	L	A	V	K	F	I	I	P	P	N	T	R	V	G	T	K	R	.	.	.	.	Y	M	P	P	E	V	L	D	E	S	L	N	R	N	H	F	Q	S	Y	I	M
Template Known Secondary structure			S		B		S	T	T		B						S				G	G	G					T	T	S								T	T										S	S		S		G	G	.	.	.	.	G							T	S				T	T		T
Template Predicted Secondary structure																																																								.	.	.	.
Template SS confidence
	315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.					370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390

	439	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.																.	.	.	.	.	.	.	470	.		.	.	.	.	.	.	.	.	480						.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.										.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.										.	.	.	.	.
Query Sequence	S	D	V	W	S	F	G	I	L	L	T	E	L	I	T	K	G	R	I	P	Y	P	G	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	K	R	E	V	L	E	Q	V	.	E	Q	G	Y	H	M	P	C	P	.	.	.	.	.	P	G	C	P	A	S	L	Y	E	A	M	E	Q	T	W	R	L
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.										.	.	.	.	.
Alig confidence																.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.										.	.	.	.	.
Template Conservation																.
Template Sequence	A	D	M	Y	S	F	G	L	I	L	W	E	V	A	R	.	R	C	V	S	G	G	I	V	E	E	Y	Q	L	P	Y	H	D	L	V	P	S	D	P	S	Y	E	D	M	R	E	I	V	C	I	K	K	L	R	P	S	F	P	N	R	W	S	S	D	E	C	L	R	Q	M	G	K	L	M	T	E	C	W	A	H
Template Known Secondary structure															T	.	T	B		B	T	T	B							T	T	T	T	T	S		S	S											T	T	S								G	G	G	G	G															S		S
Template Predicted Secondary structure																.
Template SS confidence
	398	.	400	.	.	.	.	.	.	.	.	.	410	.	.		.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.

	498	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520
Predicted Secondary structure
Query SS confidence
Query Sequence	D	P	E	E	R	P	T	F	E	Y	L	Q	S	F	L	E	D	Y	F	T	S	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence	N	P	A	S	R	L	T	A	L	R	V	K	K	T	L	A	K	M	S	E	S	Q	D
Template Known Secondary structure	S	G	G	G	S																T	T	T
Template Predicted Secondary structure
Template SS confidence
	477	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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