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Job DescriptionP09769
Confidence100.00%DateFri May 25 09:50:58 BST 2012
Rank156Aligned Residues237
% Identity27%Templatec3igoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calmodulin-domain protein kinase 1; PDBTitle: crystal structure of cryptosporidium parvum cdpk1, cgd3_920
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  SSITLERRLGTGCFGDVWLGTWN. GSTKVAVKTLKP. . GTMSPKAFLEEAQVMKLLRHDKLVQLYAVVSEEP. IYIVTEF
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Template Sequence  ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGEL
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SS
TTT

B


T


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SS

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   74.....80.........90.........100.........110.........120.........130.........140.........150...
 
   337..340.........350.........360.........370.........380.........390 .........400.........410...
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Query Sequence  MCHGSLLDFLKNPEGQDLRLPQLVDMAAQVAEGMAYMERMNYIHRDLRAANILV. . . GERLACKIADFGLARLIKDDEYN
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Template Sequence  YTGGELFDEIIKRK. . RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTTA
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S
BS..S

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S


GGGSSSSTT


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G
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   155....160........ .170.........180.........190.........200.........210.........220.........230..
 
   414.....420.........430.........440.........450.........460.........470.... .....480.........490
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Query Sequence  PCQGSKFPIKWTAPEAALFGRFTIKSDVWSFGILLTELITKGRIPYPGMNKREVLEQVEQG. . . YHMPCPPGCPASLYEA
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Template Sequence  . . . . . . . . . . YYIAPEVLRGTYDEKCDVWSAGVILYILLS. GTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDL
Template Known Secondary structure  ..........GG

GGGGGT


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SGGGGGS
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   240.........250.........260......... 270.........280.........290.........300........
 
   491........500.........510
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Query Sequence  MEQTWRLDPEERPTFEYLQS
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Template Sequence  IRKMLTFHPSLRITATQCLE
Template Known Secondary structure  T
SSTTTS

T
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   309310.........320........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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