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Job DescriptionP09769
Confidence100.00%DateFri May 25 09:50:58 BST 2012
Rank81Aligned Residues244
% Identity23%Templatec2qg5D_
PDB info PDB header:transferaseChain: D: PDB Molecule:calcium/calmodulin-dependent protein kinase; PDBTitle: cryptosporidium parvum calcium dependent protein kinase cgd7_1840
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   261........270.........280.... .....290... ......300.........310.........320......... 330.......
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Query Sequence  SSITLERRLGTGCFGDVWLGTWNG. STKVAVKTL. KPGTMSPKAFLEEAQVMKLLRHDKLVQLYAVVSEEP. IYIVTEFM
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Template Sequence  QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELC
Template Known Secondary structure  TTTTT

TTT
S
TT

BTTB


SS


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   26...30.........40.........50.........60.........70.........80.........90.........100.....
 
   338.340.........350.........360.........370.........380.........390 .........400.........410....
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Query Sequence  CHGSLLDFLKNPEGQDLRLPQLVDMAAQVAEGMAYMERMNYIHRDLRAANILV. . . GERLACKIADFGLARLIKDDEYNP
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Template Sequence  TGGELFERVVHKR. . VFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMR
Template Known Secondary structure 
SGGGGGTTTS..S

TT



SGGGSSSSTT




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TT

B
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   106...110........ .120.........130.........140.........150.........160.........170.........180...
 
   415....420.........430.........440.........450.........460.........470.........480 .........490..
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Query Sequence  CQGSKFPIKWTAPEAALFGRFTIKSDVWSFGILLTELITKGRIPYPGMNKREVLEQVEQGYHMPCP. . PGCPASLYEAME
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Template Sequence  TK. . VGTPYYVSPQVLEGL. YGPECDEWSAGVMMYVLLC. GYPPFSAPTDEVMLKIREGTFTFPEKDWLNVSPQAESLIR
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   184. ....190.........200 .........210......... 220.........230.........240.........250.........
 
   493......500.........510
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Query Sequence  QTWRLDPEERPTFEYLQS
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Template Sequence  RLLTKSPKQRITSLQALE
Template Known Secondary structure  S
SSTTTS

TT
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   261........270........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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