Job Description P09769 Confidence 100.00% Date Fri May 25 09:50:58 BST 2012 Rank 249 Aligned Residues 231 % Identity 32% Template c2oidA_ PDB info PDB header:transferase Chain: A: PDB Molecule:interleukin-1 receptor-associated kinase 4; PDBTitle: crystal structure of irak4 kinase domain complexed with2 amppnp Resolution 2.30 Å

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		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	R	S	S	I	T	L	E	R	R	L	G	T	G	C	F	G	D	V	W	L	G	T	W	N	G	S	T	K	V	A	V	K	T	L	K	P	G	T	M	S	P	K	A	F	L	E	E	A	Q	V	M	K	L	L	R	H	D	K	L	V	Q	L	Y	A	V	V	S	E	E	P	I	Y	I	V	T	E	F	M
Query Conservation
Alig confidence																											.									.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Template Conservation																											.									.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Template Sequence		F	D	E	R	P	I	S	V	G	G	N	K	G	E	G	G	F	G	V	V	Y	K	G	Y	V	.	N	N	T	T	V	A	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	I	K	V	M	A	K	C	Q	H	E	N	L	V	E	L	L	G	F	S	.	.	.	.	.	C	L	V	Y	V	Y	M
Template Known Secondary structure		T			S		G	G	G	T	S						T	T									.	T	T							.	.	.	.	.	.	.	.	.	.	.	.	.												T	T	B								.	.	.	.	.
Template Predicted Secondary structure																											.									.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.														.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.						.	.	.	.	.	.	240
		338	.	340	.	.	.	.	.	.		.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		C	H	G	S	L	L	D	F	L	.	K	N	P	E	G	Q	D	L	R	L	P	Q	L	V	D	M	A	A	Q	V	A	E	G	M	A	Y	M	E	R	M	N	Y	I	H	R	D	L	R	A	A	N	I	L	V	G	E	R	L	A	C	K	I	A	D	F	G	L	A	R	L	I	K	D	D	E	Y	N	P	C	Q
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence		P	N	G	S	L	L	D	R	L	S	C	L	D	G	T	P	P	L	S	W	H	M	R	C	K	I	A	Q	G	A	A	N	G	I	N	F	L	H	E	N	H	H	I	H	R	D	I	K	S	A	N	I	L	L	D	E	A	F	T	A	K	I	S	D	F	G	L	A	R	A	S	E	V	M	R	I	V	G	T	T
Template Known Secondary structure		T	T		B						T	T	G	G	G																										T	T				S			S	G	G	G					T	T									S	S											S		G
Template Predicted Secondary structure
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.															.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	S	K	F	P	I	K	W	T	A	P	E	A	A	L	F	G	R	F	T	I	K	S	D	V	W	S	F	G	I	L	L	T	E	L	I	T	K	G	R	I	P	Y	P	G	M	N	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	E	V	L	E	Q	V	E	Q	G	Y	H	M	P	C	P	P	G
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																															.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.																															.
Template Sequence		.	.	.	.	.	.	.	A	Y	M	A	P	E	A	L	R	G	E	I	T	P	K	S	D	I	Y	S	F	G	V	V	L	L	E	I	I	T	.	G	L	P	A	V	D	E	H	R	E	P	Q	L	L	L	D	I	K	E	E	I	E	D	E	E	K	T	I	E	D	Y	I	D	K	K	M	N	D	A	D	S	T
Template Known Secondary structure		.	.	.	.	.	.	.	G	G			T	T	T	T	T	T																					.				S	B		T	T	S	S	S	S	B	G	G	G							T	T	S	S						S		S	S		S
Template Predicted Secondary structure		.	.	.	.	.	.	.																															.
Template SS confidence
									353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.		.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
		483	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	P	A	S	L	Y	E	A	M	E	Q	T	W	R	L	D	P	E	E	R	P	T	F	E	Y	L	Q	S	F	L	E	D	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V	E	A	M	Y	S	V	A	S	Q	C	L	H	E	K	K	N	K	R	P	D	I	K	K	V	Q	Q	L	L	Q	E	M
Template Known Secondary structure														T		S	S	T	T	T	S													T
Template Predicted Secondary structure
Template SS confidence
		425	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions