Return to main results Retrieve Phyre Job Id

Job DescriptionP09769
Confidence99.77%DateFri May 25 09:50:58 BST 2012
Rank345Aligned Residues101
% Identity30%Templatec2lctA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:proto-oncogene vav; PDBTitle: solution structure of the vav1 sh2 domain complexed with a syk-derived2 doubly phosphorylated peptide
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   134.....140.........150.........160.........170.........180.........190.........200.........210...
Predicted Secondary structure 
















































Query SS confidence 















































































Query Sequence  APVDSIQAEEWYFGKIGRKDAERQLLSPGNPQGAFLIRESETTKGAYSLSIRDWDQTRGDHVKHYKIRKLDMGGYYITTR
Query Conservation            

 
 
 
  

  
       
 



 

       


          
 
  
     
       
Alig confidence 


























..























.....








.











Template Conservation 
    
    

 
 


  

 

  ..   
 



 
        


  .....     
  
.        
   
Template Sequence  GHMQDLSVHLWYAGPMERAGAESILAN. . RSDGTFLVRQRVKDAAEFAISIKY. . . . . NVEVKHIKI. MTAEGLYRITEK
Template Known Secondary structure 

SS
STTSSSS

..S
TTB

SSS
S
.....SSS
.TTSSSS
Template Predicted Secondary structure 














..









.....



.





Template SS confidence 















































































   661........670.........680....... ..690.........700.........710. ........720 .........730..
 
   214.....220.........230 .........240..
Predicted Secondary structure 




.....











Query SS confidence 
















. . . . .











Query Sequence  VQFNSVQELVQHYMEVN. . . . . DGLCNLLIAPCT
Query Conservation    
 

 


  
    .....      
     
Alig confidence 
















.....











Template Conservation    
 

  

  
           
   
  
  
Template Sequence  KAFRGLTELVEFYQQNSLKDCFKSLDTTLQFPFK
Template Known Secondary structure  SSSTTS
SSS





B
S
Template Predicted Secondary structure 





















Template SS confidence 

































   733......740.........750.........760......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions