Return to main results Retrieve Phyre Job Id

Job DescriptionP09769
Confidence99.79%DateFri May 25 09:50:58 BST 2012
Rank337Aligned Residues112
% Identity29%Templatec2dlzA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:protein vav-2; PDBTitle: solution structure of the sh2 domain of human protein vav-2
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   123......130.........140.........150.........160.........170.........180.........190.........200..
Predicted Secondary structure 














































Query SS confidence 















































































Query Sequence  GKTGCIPSNYVAPVDSIQAEEWYFGKIGRKDAERQLLSPGNPQGAFLIRESETTKGAYSLSIRDWDQTRGDHVKHYKIRK
Query Conservation 
  
  
   
          

 
 
 
  

  
       
 



 

       


          
 
  
  
Alig confidence 











....





















..























.....










Template Conservation    
         ....
    

 
 


  

 

  ..   
 



 
        


  .....     
  
  
Template Sequence  GSSGSSGSREID. . . . YTAYPWFAGNMERQQTDNLLKS. . HASGTYLIRERPAEAERFAISIKF. . . . . NDEVKHIKVVE
Template Known Secondary structure 


S


S



....GGGSTTS

..S
TTB

S
SS


.....SSS
Template Predicted Secondary structure 











....












..









.....


Template SS confidence 















































































   1........10.. .......20.........30.... .....40.........50........ .60.........
 
   203......210.........220.........230 .........240......
Predicted Secondary structure 













.....















Query SS confidence 



























. . . . .















Query Sequence  LDMGGYYITTRVQFNSVQELVQHYMEVN. . . . . DGLCNLLIAPCTIMKP
Query Conservation     
         
 

 


  
    .....      
         
Alig confidence 
.

























.....















Template Conservation   .     
     
 

  

  
    
      
   
  

  
  
Template Sequence  K. DNWIHITEAKKFDSLLELVEYYQCHSLKESFKQLDTTLKYPYSGPSS
Template Known Secondary structure  .TTSTTS

BSSTTS
TTTT
TT





B

S



Template Predicted Secondary structure 
.


























Template SS confidence 
















































   70 .........80.........90.........100.........110.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions