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Job DescriptionP09769
Confidence100.00%DateFri May 25 09:50:58 BST 2012
Rank67Aligned Residues245
% Identity22%Templatec2bmcD_
PDB info PDB header:transferaseChain: D: PDB Molecule:serine threonine-protein kinase 6; PDBTitle: aurora-2 t287d t288d complexed with pha-680632
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  AWEISRSSITLERRLGTGCFGDVWLGTWN. GSTKVAVKTLKP. . . . GTMSPKAFLEEAQVMKLLRHDKLVQLYAVVSEEP
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Template Sequence  QWAL. . EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT
Template Known Secondary structure 


G..GG
SSTTT

TT
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TTB


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Query Sequence  . IYIVTEFMCHGSLLDFLKNPEGQDLRLPQLVDMAAQVAEGMAYMERMNYIHRDLRAANILVGERLACKIADFGLARLIK
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Template Sequence  RVYLILEYAPLGTVYRELQKLS. . KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS. . . .
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TT
BS..S

TTT




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Query Sequence  DDEYNPCQGSKFPIKWTAPEAALFGRFTIKSDVWSFGILLTELITKGRIPYPGMNKREVLEQVEQGYHMPCPPGCPASLY
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Template Sequence  . . . . . . . . . . . VTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV. GKPPFEANTYQETYKRISRVE. FTFPDFVTEGAR
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GGG

GGGTTTTSSGGG.SS
TT

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   279280.........290.........300.........310.. .......320.........330... ......340.....
 
   489490.........500.........510.........520..
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Query Sequence  EAMEQTWRLDPEERPTFEYLQSFLEDYFTSAEPQ
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Template Sequence  DLISRLLKHNPSQRPMLREVLEH. . PWITANSSK
Template Known Secondary structure  S
SSGGGS

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Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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