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Job DescriptionP43403
Confidence99.98%DateThu Apr 26 09:45:10 BST 2012
Rank272Aligned Residues281
% Identity13%Templated3bqca1
SCOP infoProtein kinase-like (PK-like) Protein kinase-like (PK-like) Protein kinases, catalytic subunit
Resolution1.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   302.......310.........320.........330.........340.........350.........360.........370.........380.
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Query Sequence  PDKPRPMPMDTSVYESPYSDPEELKDKKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTE
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Template Sequence  GPVPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNE. . KVVVKILKPVK. . . . KK
Template Known Secondary structure 






SSSTTTTTTS

GGG






GGG
SSTTTT..
SS
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   3......10.........20.........30.........40.........50.........60... ......70.... ..
 
   382.......390... ......400.........410.........420.........430.........440.........450.........460
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Query Sequence  EMMREAQIMHQL. DNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHR
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Template Sequence  KIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRD
Template Known Secondary structure  TTSTTB


TTT
S


S
BGGGTTTS

TT


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   77..80.........90.........100.........110.........120.........130.........140.........150......
 
   461........470.........480.........490.........500.........510.........520.........530.........540
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Query Sequence  DLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPY
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Template Sequence  VKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY. . . FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF
Template Known Secondary structure 
SGGGTTTT

GGG


TT



S

S
GG...G

TT




TT
SSSS
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   157..160.........170.........180.........190...... ...200.........210.........220.........230...
 
   541........550... ......560.........570.........580....
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Query Sequence  KKMKGPEVMAFIE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . QGKRMECPPECPPELYALMSDCWIYKWEDRP
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Template Sequence  HGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRL
Template Known Secondary structure 

SS
TT



GGGGGT







GGGG

TTTGGG

S
SSGGGS
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   234.....240.........250.........260.........270.........280.........290.........300.........310...
 
   585....590.
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Query Sequence  DFLTVEQ
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Template Sequence  TAREAME
Template Known Secondary structure 
T
Template Predicted Secondary structure 

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   314.....320
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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