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Job DescriptionP43403
Confidence100.00%DateThu Apr 26 09:45:10 BST 2012
Rank101Aligned Residues242
% Identity24%Templated1nvra_
SCOP infoProtein kinase-like (PK-like) Protein kinase-like (PK-like) Protein kinases, catalytic subunit
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   336...340.........350.........360.........370.........380.........390.........400..... ....410....
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Query Sequence  NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC. QAEALMLVM
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Template Sequence  EDWDLVQTLGEGAYGEVQLAVNRVTEE. . AVAVKIVDMKN. . . . . . . IKKEICINKMLNHENVVKFYGHRREGNIQYLFL
Template Known Secondary structure  T
TTTTT

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TTB

TT
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   7..10.........20.........30... ......40.... .....50.........60.........70.......
 
   415....420.........430.........440.........450.........460.........470.........480.........490....
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Query Sequence  EMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYT
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Template Sequence  EYCSGGELFDRIEPDIG. MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL
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TTGGGGSBTTTB.

TT
S


GGG
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   85....90.........100. ........110.........120.........130.........140.........150.........160...
 
   495....500.........510... ......520.........530.........540... ......550.........560.........570.
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Query Sequence  ARSAGKWPLKWYAPECINF. RKFSSRSDVWSYGVTMWEALSYGQKPYKKM. . KGPEVMAFIEQGKRMECPPECPPELYAL
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Template Sequence  LNKMCG. TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA. GELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL
Template Known Secondary structure  B



S.
GGGS
T
SSB
.SS
S
SSSSTTSTT
TTSTTGGGS
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   164..... 170.........180.........190.........200... ......210.........220.........230.........240.
 
   572.......580.........
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Query Sequence  MSDCWIYKWEDRPDFLTV
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Template Sequence  LHKILVENPSARITIPDI
Template Known Secondary structure  S
SSTTTS

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   242.......250.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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