Return to main results Retrieve Phyre Job Id

Job DescriptionP43403
Confidence100.00%DateThu Apr 26 09:45:10 BST 2012
Rank242Aligned Residues267
% Identity21%Templated1cm8a_
SCOP infoProtein kinase-like (PK-like) Protein kinase-like (PK-like) Protein kinases, catalytic subunit
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   333......340.........350.........360.........370..... ....380.........390.........400......
Predicted Secondary structure 
















.





.....
Query SS confidence 










































.






























. . . . .
Query Sequence  KRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT. EKADTEEMMREAQIMHQLDNPYIVRLIGVCQ. . . . .
Query Conservation             

 
 

 
             



 
    .          
  

  
 




 
 
   .....
Alig confidence 





























..










.






























.....
Template Conservation 
    
 
   

 
 

 

 
     
 .. 



 
               
  

  
 
 


            
Template Sequence  VTKTAWEVRAVYRDLQPVAVCSAVDGRTGA. . KVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETL
Template Known Secondary structure 
SSS

BSS

TTT

..
SSTTSS

BTTB


S
S
SST
Template Predicted Secondary structure 








..





















Template SS confidence 















































































   16...20.........30.........40..... ....50.........60.........70.........80.........90...
 
   407..410.........420.........430.........440.........450.........460.........470.........480....
Predicted Secondary structure  ..































Query SS confidence  . .













































































Query Sequence  . . AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSK
Query Conservation  ..     

 
    


   
                 


 

 


   






  



     


 




 
Alig confidence  ..






















...



















































Template Conservation         

                ...                
       
                           
Template Sequence  DDFTDFYLVMPFMGTDLGKLMKHEK. . . LGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLAR
Template Known Secondary structure  TT





S

...

TT




GGG
TT




TT
Template Predicted Secondary structure 











...




































Template SS confidence 















































































   100.........110.........120.... .....130.........140.........150.........160.........170......
 
   485....490.........500.........510.........520.........530.........540.........550.........
Predicted Secondary structure 


































.....
Query SS confidence 










































































. . . . .
Query Sequence  ALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRME. . . . .
Query Conservation                   
    


 
     
  







 
 
  
 
  
            
    
  .....
Alig confidence 










.......































.























.....
Template Conservation             .......                       
        .                
            
Template Sequence  QADSEMGVVTR. . . . . . . WYRAPEVILNWMRYTQTVDIWSVGCIMAEMIT. GKTLFKGSDHLDQLKEIMKVTGTPPAEFV
Template Known Secondary structure 

S





G.......GG

TTTT


TT.SS
SS

SS



Template Predicted Secondary structure 





.......

























.













Template SS confidence 















































































   177..180....... ..190.........200.........210......... 220.........230.........240........
 
   560.........570.........580.........590.........600.........610....
Predicted Secondary structure  .........................
























Query SS confidence  . . . . . . . . . . . . . . . . . . . . . . . . .






















































Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVEGPPGSTQKA
Query Conservation  ......................... 
   
     
   
    
  


   
   
             
       
Alig confidence  .........................





























...





















Template Conservation                                
    


   
  

  



 

...
 

 
                
Template Sequence  QRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEA. . . LAHPYFESLHQVQKYDDSRTLD
Template Known Secondary structure  T
S
S






GGGT
TT

S
SSTTTS

...SGGGTTT










Template Predicted Secondary structure 
























...













Template SS confidence 















































































   251........260.........270.........280.........290.........300..... ....310.........320.......
 
   615
Predicted Secondary structure 
Query SS confidence 
Query Sequence  E
Query Conservation   
Alig confidence 
Template Conservation   
Template Sequence  E
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   339
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions