 |
| Job Description | P43403 | | Confidence | 100.00% | Date | Thu Apr 26 09:45:10 BST 2012 |
| Rank | 249 | Aligned Residues | 251 |
| % Identity | 23% | Template | c4aaaA_ |
| PDB info |
PDB header:transferase | Chain: A: PDB Molecule:cyclin-dependent kinase-like 2; |
PDBTitle: crystal structure of the human cdkl2 kinase domain
|
| Resolution | 1.53 Å |
|
 |
|   |   |
330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | |
. | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | |
. | . |
| Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|  |  |  | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  | . |  |
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
| Query Sequence |   |
L | F | L | K | R | D | N | L | L | I | A | D | I | E | L | G | C | G | N | F | G | S | V | R | Q | G | V | Y | R | M | R | K | K | Q | I | D | V | A | I | K | V | L | K | Q | G | T | . |
E | K | A | D | T | E | E | M | M | R | E | A | Q | I | M | H | Q | L | D | N | P | Y | I | V | R | L | I | G | V | C | . |
Q | A |
| Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |
|
|
|
|
|   |
|   |
|   |   | . |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
| Template Conservation |   |
  |   |   |   |   |
|   |   |
|   |   |   |   |   |
|
|   |
|   |
|
|   |
|
|   |
|   |   |   |   |   |
|   | . | . |   |
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |
|   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |
| Template Sequence |   |
L | Y | F | Q | S | M | E | K | Y | E | N | L | G | L | V | G | E | G | S | Y | G | M | V | M | K | C | R | N | K | D | T | G | R | . |
. |
I | V | A | I | K | K | F | L | E | S | D | D | D | K | M | V | K | K | I | A | M | R | E | I | K | L | L | K | Q | L | R | H | E | N | L | V | N | L | L | E | V | C | K | K | K |
| Template Known Secondary structure |   |
|
|
| B |
| G | G | G |  |  |  |  |  |  | G | G | G | G | T | T | S | S |  |  |  |  |  |  | T | T | T |
|
| . | . |  |  |  |  |  |  |  |  | S |
| S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| T | T | B |
|
|  |  |  |  |  |  |  | T |
| Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  | . | . |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|