Return to main results Retrieve Phyre Job Id

Job DescriptionP43403
Confidence100.00%DateThu Apr 26 09:45:10 BST 2012
Rank75Aligned Residues260
% Identity34%Templatec3v5qB_
PDB info PDB header:transferase/transferase inhibitorChain: B: PDB Molecule:nt-3 growth factor receptor; PDBTitle: discovery of a selective trk inhibitor with efficacy in rodent cancer2 tumor models
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   329330.........340......... 350.........360.........370.........380.........390.........400.......
Predicted Secondary structure 















.











Query SS confidence 




















.

























































Query Sequence  KLFLKRDNLLIADIELGCGNF. GSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA
Query Conservation                 

 
 
.
 
             



 
              
  

  
 




 
 
    
Alig confidence 




















.











..










.































Template Conservation      
          

 
 
 
 

        ..  



 
   .          

  
  
 




        
Template Sequence  HVQHIKRRDIVLKRELGFKVFLAECYNLSPTKDK. . MLVAVKALKDP. TLAARKDFQREAELLTNLQHEHIVKFYGVCGD
Template Known Secondary structure 



GGG


S

SSSS..

S
.



TTB



Template Predicted Secondary structure 





..


.













Template SS confidence 















































































  
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions