Job Description P43403 Confidence 100.00% Date Thu Apr 26 09:45:10 BST 2012 Rank 231 Aligned Residues 265 % Identity 25% Template c3s95A_ PDB info PDB header:transferase/antibiotic Chain: A: PDB Molecule:lim domain kinase 1; PDBTitle: crystal structure of the human limk1 kinase domain in complex with2 staurosporine Resolution 1.65 Å

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		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.		.	.	.	.
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		F	L	K	R	D	N	L	L	I	A	D	I	E	L	G	C	G	N	F	G	S	V	R	Q	G	V	Y	R	M	R	K	K	Q	I	D	V	A	I	K	V	L	K	Q	G	T	E	K	A	D	T	E	E	M	M	R	E	A	Q	I	M	H	Q	L	D	N	P	Y	I	V	R	L	I	G	V	C	.	Q	A	E	A
Query Conservation																																																																													.
Alig confidence																																		.	.											.																															.
Template Conservation																																		.	.											.
Template Sequence		R	I	F	R	P	S	D	L	I	H	G	E	V	L	G	K	G	C	F	G	Q	A	I	K	V	T	H	R	E	T	G	E	.	.	V	M	V	M	K	E	L	I	R	F	.	D	E	E	T	Q	R	T	F	L	K	E	V	K	V	M	R	C	L	E	H	P	N	V	L	K	F	I	G	V	L	Y	K	D	K	R
Template Known Secondary structure						G	G	G											S	S									T	T	T			.	.								S			.																T	T				T	T	B										T	T
Template Predicted Secondary structure																																		.	.											.
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.			.	.	.	.	.	.	370	.	.	.		.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	L	V	M	E	M	A	G	G	G	P	L	H	K	F	L	V	G	K	R	E	E	I	P	V	S	N	V	A	E	L	L	H	Q	V	S	M	G	M	K	Y	L	E	E	K	N	F	V	H	R	D	L	A	A	R	N	V	L	L	V	N	R	H	Y	A	K	I	S	D	F	G	L	S	K	A	L	G	A	D
Query Conservation
Alig confidence																																																																													.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		L	N	F	I	T	E	Y	I	K	G	G	T	L	R	G	I	I	K	S	M	D	S	Q	Y	P	W	S	Q	R	V	S	F	A	K	D	I	A	S	G	M	A	Y	L	H	S	M	N	I	I	H	R	D	L	N	S	H	N	C	L	V	R	E	N	K	N	V	V	V	A	D	F	G	L	A	R	.	.	.	.	.
Template Known Secondary structure										T	T		B										T	T	S																						T	T				S			S	T	T	S					T	T	S								T	T			.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.
		490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.			.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.
Query SS confidence																																																													.	.
Query Sequence		D	S	Y	Y	T	A	R	S	A	G	K	W	P	L	K	W	Y	A	P	E	C	I	N	F	R	K	F	S	S	R	S	D	V	W	S	Y	G	V	T	M	W	E	A	L	S	Y	G	Q	K	P	Y	K	K	M	K	G	P	E	V	.	.	M	A	F	I	E	Q	G	K	R	M	E	C	P	P	E	C	P	P	E
Query Conservation																																																													.	.
Alig confidence		.	.	.	.																																										.														.	.
Template Conservation		.	.	.	.																																										.
Template Sequence		.	.	.	.	L	M	V	Y	T	V	V	G	N	P	Y	W	M	A	P	E	M	I	N	G	R	S	Y	D	E	K	V	D	V	F	S	F	G	I	V	L	C	E	I	I	G	.	R	V	N	A	D	P	D	Y	L	P	R	T	M	D	F	G	L	N	V	R	G	F	L	D	R	Y	C	P	P	N	C	P	P	S
Template Known Secondary structure		.	.	.	.								S		G	G	G							T	T					T																	.	T			S	S	T	T	T	S		B		T	T	S	S	B									T			T	T			T	T
Template Predicted Secondary structure		.	.	.	.																																										.
Template SS confidence
						484	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.		.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.
		568	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Y	A	L	M	S	D	C	W	I	Y	K	W	E	D	R	P	D	F	L	T	V	E	Q	R	M	R	A	C	Y	Y	S	L	A	S	K	V	E	G	P	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	F	P	I	T	V	R	C	C	D	L	D	P	E	K	R	P	S	F	V	K	L	E	H	W	L	E	T	L	R	M	H	L	A	G	H	L	P	L	G	P
Template Known Secondary structure										T		S	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		579	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions