Job Description P43403 Confidence 100.00% Date Thu Apr 26 09:45:10 BST 2012 Rank 150 Aligned Residues 268 % Identity 19% Template c3p1aA_ PDB info PDB header:transferase Chain: A: PDB Molecule:membrane-associated tyrosine- and threonine-specific cdc2- PDBTitle: structure of human membrane-associated tyrosine- and threonine-2 specific cdc2-inhibitory kinase myt1 (pkmyt1) Resolution 1.70 Å

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		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.		.	.	.	.	380	.	.	.	.
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		R	P	M	P	M	D	T	S	V	Y	E	S	P	Y	S	D	P	E	E	L	K	D	K	K	L	F	L	K	R	D	N	L	L	I	A	D	I	E	L	G	C	G	N	F	G	S	V	R	Q	G	V	Y	R	M	R	K	K	Q	I	D	V	A	I	K	V	L	K	Q	G	T	.	E	K	A	D	T	E	E	M	M
Query Conservation																																																																								.
Alig confidence																																																											.	.												.
Template Conservation																																																											.	.
Template Sequence		Q	P	R	R	V	S	F	R	G	E	A	S	E	T	L	Q	S	P	G	Y	D	P	S	R	P	E	S	F	F	Q	Q	S	F	Q	R	L	S	R	L	G	H	G	S	Y	G	E	V	F	K	V	R	S	K	E	D	G	R	.	.	L	Y	A	V	K	R	S	M	S	P	F	R	G	P	K	D	R	A	R	K	L
Template Known Secondary structure								S	S			S		S	S				T	T			T	T	S	S	S																	T	T									T	T	T	S		.	.								S	S	S			S
Template Predicted Secondary structure																																																											.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		385	.	.	.	.	390	.	.	.		.	.	.	.	.	.	400	.	.	.	.	.		.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.
Predicted Secondary structure											.													.
Query SS confidence											.													.
Query Sequence		R	E	A	Q	I	M	H	Q	L	.	D	N	P	Y	I	V	R	L	I	G	V	C	.	Q	A	E	A	L	M	L	V	M	E	M	A	G	G	G	P	L	H	K	F	L	V	G	K	R	E	E	I	P	V	S	N	V	A	E	L	L	H	Q	V	S	M	G	M	K	Y	L	E	E	K	N	F	V	H	R	D	L
Query Conservation											.													.
Alig confidence											.													.														.
Template Conservation																																						.
Template Sequence		A	E	V	G	S	H	E	K	V	G	Q	H	P	C	C	V	R	L	E	Q	A	W	E	E	G	G	I	L	Y	L	Q	T	E	L	C	G	.	P	S	L	Q	Q	H	C	E	A	W	G	A	S	L	P	E	A	Q	V	W	G	Y	L	R	D	T	L	L	A	L	A	H	L	H	S	Q	G	L	V	H	L	D	V
Template Known Secondary structure														T	T	B										T	T											.		B										S																								T	T
Template Predicted Secondary structure																																						.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		463	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	R	N	V	L	L	V	N	R	H	Y	A	K	I	S	D	F	G	L	S	K	A	L	G	A	D	D	S	Y	Y	T	A	R	S	A	G	K	W	P	L	K	W	Y	A	P	E	C	I	N	F	R	K	F	S	S	R	S	D	V	W	S	Y	G	V	T	M	W	E	A	L	S	Y	G	Q	K	P	Y	K	K
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.																	.																									.
Template Conservation																							.	.	.	.	.	.	.	.	.	.																	.																									.
Template Sequence		K	P	A	N	I	F	L	G	P	R	G	R	C	K	L	G	D	F	G	L	L	.	.	.	.	.	.	.	.	.	.	V	E	L	G	V	Q	E	G	D	P	R	Y	M	A	P	E	.	L	L	Q	G	S	Y	G	T	A	A	D	V	F	S	L	G	L	T	I	L	E	V	A	C	.	N	M	E	L	P	H	G
Template Known Secondary structure		S	G	G	G					G	G	G								T	T		.	.	.	.	.	.	.	.	.	.										G	G	G			G	G	.	G	G	G	T			S	T																	.	T					S	S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.																	.																									.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.											.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.		.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.		.	.	.	.	300	.	.
		543	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	G	P	E	V	M	A	F	I	E	Q	G	K	R	M	E	C	P	P	E	C	P	P	E	L	Y	A	L	M	S	D	C	W	I	Y	K	W	E	D	R	P	D	F	L	T	V	E
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	G	E	G	W	Q	Q	L	R	Q	G	Y	L	P	P	E	F	T	A	G	L	S	S	E	L	R	S	V	L	V	M	M	L	E	P	D	P	K	L	R	A	T	A	E	A	L	L
Template Known Secondary structure		.	.								T	T	T								T	T	S												S		S	S	T	T	T	S
Template Predicted Secondary structure		.	.
Template SS confidence
				309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions