Job Description P43403 Confidence 98.05% Date Thu Apr 26 09:45:10 BST 2012 Rank 376 Aligned Residues 127 % Identity 19% Template c3mesB_ PDB info PDB header:transferase Chain: B: PDB Molecule:choline kinase; PDBTitle: crystal structure of choline kinase from cryptosporidium2 parvum iowa ii, cgd3_2030 Resolution 2.35 Å

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		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.		.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		I	E	L	G	C	G	N	F	G	S	V	R	Q	G	V	Y	R	M	R	K	K	Q	I	D	V	A	I	K	V	L	K	Q	G	T	E	K	A	D	T	E	E	M	M	R	E	A	Q	I	M	H	Q	L	D	.	N	P	Y	I	V	R	L	I	G	V	C	Q	A	E	A	L	M	L	V	M	E	M	A	G	G	G
Query Conservation																																																							.
Alig confidence																																									.	.	.	.											.														.	.	.
Template Conservation																																									.	.	.	.																									.	.	.
Template Sequence		K	Q	I	F	S	G	L	T	N	Q	L	F	V	V	S	I	V	N	E	L	K	H	P	R	I	L	F	R	I	Y	G	K	H	V	F	Y	D	S	K	.	.	.	.	V	E	L	D	V	F	R	Y	L	S	N	I	N	I	A	P	N	I	I	A	D	F	P	E	.	.	.	G	R	I	E	E	F	I	D	G	E
Template Known Secondary structure								S	S	S														S																	.	.	.	.												T	T	S	S								T	T	.	.	.									S
Template Predicted Secondary structure																																									.	.	.	.																									.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.					.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.				.	140	.	.	.	.	.	.	.	.
		421	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	L	H	K	F	L	V	G	K	R	E	E	I	P	V	S	N	V	A	E	L	L	H	Q	V	S	M	G	M	K	Y	L	E	E	K	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.
Template Sequence		P	L	T	T	.	.	.	.	.	.	.	.	.	K	Q	L	Q	L	T	H	I	C	V	E	V	A	K	N	M	G	S	L	H	I	I	N	S	K	R	A	D	F	P	S	R	F	D	K	E	P	I	L	F	K	R	I	Y	L	W	R	E	E	A	K	I	Q	V	S	K	N	N	Q	I	D	K	E	L	Y	S	K
Template Known Secondary structure					T	.	.	.	.	.	.	.	.	.	T	G	G	G	S																G	G	G	T	S		T	T	S		T	T	S			S																				T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.
Template SS confidence
		156	.	.	.										160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
																																						457	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	V	H	R	D	L	A	A	R	N	V	L	L	V	N	R	H	Y	A	K	I	S	D	F	G	L	S	K	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation																																																							.
Template Sequence		I	L	E	E	I	D	Q	L	E	E	L	I	M	G	G	E	K	F	S	M	E	R	A	L	E	L	K	L	Y	S	P	A	F	S	L	V	F	A	H	N	D	L	Q	E	N	N	L	L	Q	T	Q	N	N	.	I	R	M	I	D	Y	E	Y	S	A	I
Template Known Secondary structure						G	G	G						T	T	S	S												T	T		G	G	G							S				G	G	G					S	S		.							T	T
Template Predicted Secondary structure																																																							.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions