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Job DescriptionP43403
Confidence100.00%DateThu Apr 26 09:45:10 BST 2012
Rank62Aligned Residues234
% Identity25%Templatec3lijA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium/calmodulin dependent protein kinase with PDBTitle: crystal structure of full length cpcdpk3 (cgd5_820) in2 complex with ca2+ and amppnp
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   344.....350.........360.........370.........380.........390.........400..... ....410.........420..
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Query Sequence  LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC. QAEALMLVMEMAGGGPL
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Template Sequence  VKKLGSGEVLLCRDKVTHV. . ERAIKIIRKSSN. . . . SKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGEL
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TTT

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   65....70.........80... ......90..... ....100.........110.........120.........130........
 
   423......430.........440.........450.........460......... 470.........480.........490.........
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Query Sequence  HKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLL. . . VNRHYAKISDFGLSKALGADDSYYTARSAG
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Template Sequence  FDEIIHRMK. FNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ. . . . KKMKER
Template Known Secondary structure  SS.

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BTT....B
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   147..150..... ....160.........170.........180.........190.........200.........210..... ....220.
 
   500.........510.........520.........530.........540.........550...... ...560.........570......
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Query Sequence  KWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK. . . RMECPPECPPELYALMSDCW
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Template Sequence  LGTAYYIAPEVLR. KKYDEKCDVWSIGVILFILLA. GYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQML
Template Known Secondary structure 
S
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   222.......230.... .....240.........250..... ....260.........270.........280.........290.........
 
   577..580.........590
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Query Sequence  IYKWEDRPDFLTVE
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Template Sequence  QFDSQRRISAQQAL
Template Known Secondary structure 
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   300.........310...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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