Job Description P43403 Confidence 100.00% Date Thu Apr 26 09:45:10 BST 2012 Rank 140 Aligned Residues 259 % Identity 26% Template c3ku2A_ PDB info PDB header:transferase Chain: A: PDB Molecule:calmodulin-domain protein kinase 1; PDBTitle: crystal structure of inactivated form of cdpk1 from toxoplasma gondii,2 tgme49.101440 Resolution 2.30 Å

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		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.			.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.		.	.	.	.	410	.
Predicted Secondary structure																																											.	.																															.
Query SS confidence																																											.	.																															.
Query Sequence		D	N	L	L	I	A	D	I	E	L	G	C	G	N	F	G	S	V	R	Q	G	V	Y	R	M	R	K	K	Q	I	D	V	A	I	K	V	L	K	Q	G	T	.	.	E	K	A	D	T	E	E	M	M	R	E	A	Q	I	M	H	Q	L	D	N	P	Y	I	V	R	L	I	G	V	C	.	Q	A	E	A	L	M
Query Conservation																																											.	.																															.
Alig confidence																														.	.												.	.																															.
Template Conservation																														.	.
Template Sequence		S	D	R	Y	K	G	Q	R	V	L	G	K	G	S	F	G	E	V	I	L	C	K	D	K	I	T	G	Q	.	.	E	C	A	V	K	V	I	S	K	R	Q	V	K	Q	K	T	D	K	E	S	L	L	R	E	V	Q	L	L	K	Q	L	D	H	P	N	I	M	K	L	Y	E	F	F	E	D	K	G	Y	F	Y
Template Known Secondary structure															S	S									T	T	T			.	.									T	T	T	S		B	S	S																		T	T	B										S	S
Template Predicted Secondary structure																														.	.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.			.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.				470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.
Query SS confidence																																																												.	.	.
Query Sequence		L	V	M	E	M	A	G	G	G	P	L	H	K	F	L	V	G	K	R	E	E	I	P	V	S	N	V	A	E	L	L	H	Q	V	S	M	G	M	K	Y	L	E	E	K	N	F	V	H	R	D	L	A	A	R	N	V	L	L	.	.	.	V	N	R	H	Y	A	K	I	S	D	F	G	L	S	K	A	L	G	A
Query Conservation																																																												.	.	.
Alig confidence																						.																																						.	.	.
Template Conservation																						.
Template Sequence		L	V	G	E	V	Y	T	G	G	E	L	F	D	E	I	I	S	R	K	R	.	F	S	E	V	D	A	A	R	I	I	R	Q	V	L	S	G	I	T	Y	M	H	K	N	K	I	V	H	R	D	L	K	P	E	N	L	L	L	E	S	K	S	K	D	A	N	I	R	I	I	D	F	G	L	S	T	H	F	E	A
Template Known Secondary structure									S		B						T	T		S		.																							T	T				S	S			G	G	G				S	S	S	S	T	T								T	T	T	T	T	T	B
Template Predicted Secondary structure																						.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		489	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.				.	.	.	.	560	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.
Query SS confidence																																																																					.	.	.
Query Sequence		D	D	S	Y	Y	T	A	R	S	A	G	K	W	P	L	K	W	Y	A	P	E	C	I	N	F	R	K	F	S	S	R	S	D	V	W	S	Y	G	V	T	M	W	E	A	L	S	Y	G	Q	K	P	Y	K	K	M	K	G	P	E	V	M	A	F	I	E	Q	G	.	.	.	K	R	M	E	C	P	P	E	C	P
Query Conservation																																																																					.	.	.
Alig confidence			.	.	.	.																				.																						.																					.	.	.
Template Conservation			.	.	.	.																				.																						.
Template Sequence		S	.	.	.	.	K	K	M	K	D	K	I	G	T	A	Y	Y	I	A	P	E	V	L	H	.	G	T	Y	D	E	K	C	D	V	W	S	T	G	V	I	L	Y	I	L	L	S	.	G	C	P	P	F	N	G	A	N	E	Y	D	I	L	K	K	V	E	K	G	K	Y	T	F	E	L	P	Q	W	K	K	V	S
Template Known Secondary structure			.	.	.	.		S					T	T		T	T	T								.	S				T																	.	S	S		S	S			S	S											T						S	G	G	G	G	G	S
Template Predicted Secondary structure			.	.	.	.																				.																						.
Template SS confidence
		205					.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.		.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
		566	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	L	Y	A	L	M	S	D	C	W	I	Y	K	W	E	D	R	P	D	F	L	T	V	E	Q	R	M	R	A	C	Y	Y	S	L	A	S	K	V	E
Query Conservation
Alig confidence																										.	.	.
Template Conservation																										.	.	.
Template Sequence		E	S	A	K	D	L	I	R	K	M	L	T	Y	V	P	S	M	R	I	S	A	R	D	A	.	.	.	L	D	H	E	W	I	Q	T	Y	T	K	E	Q
Template Known Secondary structure												T		S	S	T	T	T	S							.	.	.		T	S							T		S	S
Template Predicted Secondary structure																										.	.	.
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.				.	.	.	.	.	.	.	310	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions