Job Description P43403 Confidence 100.00% Date Thu Apr 26 09:45:10 BST 2012 Rank 229 Aligned Residues 251 % Identity 20% Template c3kmuA_ PDB info PDB header:cell adhesion Chain: A: PDB Molecule:integrin-linked kinase; PDBTitle: crystal structure of the ilk/alpha-parvin core complex (apo) Resolution 1.80 Å

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		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.		.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.				.	.	.
Predicted Secondary structure																																													.																															.	.	.
Query SS confidence																																													.																															.	.	.
Query Sequence		K	R	D	N	L	L	I	A	D	I	E	L	G	C	G	N	F	G	S	V	R	Q	G	V	Y	R	M	R	K	K	Q	I	D	V	A	I	K	V	L	K	Q	G	T	.	E	K	A	D	T	E	E	M	M	R	E	A	Q	I	M	H	Q	L	D	N	P	Y	I	V	R	L	I	G	V	C	.	.	.	Q	A	E
Query Conservation																																													.																															.	.	.
Alig confidence																											.	.	.	.															.																															.	.	.
Template Conservation																											.	.	.	.
Template Sequence		I	D	F	K	Q	L	N	F	L	T	K	L	N	E	N	H	S	G	E	L	W	K	G	R	W	.	.	.	.	Q	G	N	D	I	V	V	K	V	L	K	V	R	D	W	S	T	R	K	S	R	D	F	N	E	E	C	P	R	L	R	I	F	S	H	P	N	V	L	P	V	L	G	A	C	Q	S	P	P	A	P
Template Known Secondary structure				G	G	G											T	T									.	.	.	.	T	T											T	T													G	G	G	G				S		T	T										T	T	T	S	S
Template Predicted Secondary structure																											.	.	.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.					.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.			.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
Predicted Secondary structure																							.																												.	.
Query SS confidence																							.																												.	.
Query Sequence		A	L	M	L	V	M	E	M	A	G	G	G	P	L	H	K	F	L	V	G	K	.	R	E	E	I	P	V	S	N	V	A	E	L	L	H	Q	V	S	M	G	M	K	Y	L	E	E	K	N	.	.	F	V	H	R	D	L	A	A	R	N	V	L	L	V	N	R	H	Y	A	K	I	S	D	F	G	L	S	K	A
Query Conservation																							.																												.	.
Alig confidence																							.																												.	.
Template Conservation
Template Sequence		H	P	T	L	I	T	H	W	X	P	Y	G	S	L	Y	N	V	L	H	E	G	T	N	F	V	V	D	Q	S	Q	A	V	K	F	A	L	D	X	A	R	G	X	A	F	L	H	T	L	E	P	L	I	P	R	H	A	L	N	S	R	S	V	X	I	D	E	D	X	T	A	R	I	S	X	A	D	V	K	F	S
Template Known Secondary structure		S									T	T		B							S		S	S																							T	T	S	S	S			T	T				S	G	G	G					T	T	S						G	G	G	S			T
Template Predicted Secondary structure
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
		486	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.				.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.		.	.	.	560	.
Predicted Secondary structure																																.	.	.																																										.
Query SS confidence																																.	.	.																																										.
Query Sequence		L	G	A	D	D	S	Y	Y	T	A	R	S	A	G	K	W	P	L	K	W	Y	A	P	E	C	I	N	F	R	K	.	.	.	F	S	S	R	S	D	V	W	S	Y	G	V	T	M	W	E	A	L	S	Y	G	Q	K	P	Y	K	K	M	K	G	P	E	V	M	A	F	I	E	Q	G	K	.	R	M	E	C	P
Query Conservation																																.	.	.																																										.
Alig confidence												.	.	.	.	.	.	.	.													.	.	.																				.																						.
Template Conservation												.	.	.	.	.	.	.	.																																			.
Template Sequence		F	Q	S	P	G	R	X	Y	A	P	.	.	.	.	.	.	.	.	A	W	V	A	P	E	A	L	Q	K	K	P	E	D	T	N	R	R	S	A	D	X	W	S	F	A	V	L	L	W	E	L	V	T	.	R	E	V	P	F	A	D	L	S	N	X	E	I	G	X	K	V	A	L	E	G	L	R	P	T	I	P
Template Known Secondary structure		T	S		T	T			S		G	.	.	.	.	.	.	.	.	G	G	S							S		G	G	G	S																				.		S		T	T	T	T	S												S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.																																			.
Template SS confidence
		344	.	.	.	.	.	350	.	.	.									.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.		.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
		562	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	C	P	P	E	L	Y	A	L	M	S	D	C	W	I	Y	K	W	E	D	R	P	D	F	L	T	V	E	Q	R	M	R	A	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	G	I	S	P	H	V	S	K	L	X	K	I	C	X	N	E	D	P	A	K	R	P	K	F	D	X	I	V	P	I	L	E	K	X
Template Known Secondary structure		T	T													T		S	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions