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Job DescriptionP43403
Confidence100.00%DateThu Apr 26 09:45:10 BST 2012
Rank136Aligned Residues231
% Identity24%Templatec3kl8C_
PDB info PDB header:transferase/ transferase inhibitorChain: C: PDB Molecule:calcium/calmodulin dependent protein kinase ii; PDBTitle: camkiintide inhibitor complex
Resolution3.37 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   346...350.........360.........370.........380.........390.........400..... ....410.........420....
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Query Sequence  CGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC. QAEALMLVMEMAGGGPLHK
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Template Sequence  KEELSVVRRCVHKTTGL. . EFAAKIINTD. . . . . FQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFE
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   16...20.........30.. .......40.. .......50.........60.........70.........80........
 
   425....430.........440.........450.........460.........470 .........480.........490.........500.
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Query Sequence  FLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLV. . . NRHYAKISDFGLSKALGADDSYYTARSAGKW
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Template Sequence  DIVAREF. YSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS. . . . EAWHGFAG
Template Known Secondary structure  SS.

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   100...... ...110.........120.........130.........140.........150.........160...... ...170....
 
   502.......510.........520.........530.........540.........550.........560.. .......570........
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Query Sequence  PLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPP. . . ECPPELYALMSDCWIY
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Template Sequence  TPGYLSPEVLKKDPYSKPVDIWACGVILYILLV. GYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTV
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   175....180.........190.........200....... ..210.........220.........230.........240.........250...
 
   579580.........
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Query Sequence  KWEDRPDFLTV
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Template Sequence  NPKKRITADQA
Template Known Secondary structure  SGGGS

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   254.....260....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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