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Job DescriptionP43403
Confidence100.00%DateThu Apr 26 09:45:10 BST 2012
Rank162Aligned Residues240
% Identity26%Templatec3igoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calmodulin-domain protein kinase 1; PDBTitle: crystal structure of cryptosporidium parvum cdpk1, cgd3_920
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   336...340.........350.........360.........370.........380.........390.........400..... ....410....
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Query Sequence  NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC. QAEALMLVM
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Template Sequence  ERYNIVCMLGKGSFGEVLKCKDRITQQ. . EYAVKVINKASAKNKTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG
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   74.....80.........90.........100 .........110.........120.........130.........140.........150.
 
   415....420.........430.........440.........450.........460......... 470.........480.........490.
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Query Sequence  EMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLL. . . VNRHYAKISDFGLSKALGADDS
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Template Sequence  ELYTGGELFDEIIKRKR. FSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT.
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   153......160......... 170.........180.........190.........200.........210.........220.........230
 
   492.......500.........510.........520.........530.........540.........550...... ...560........
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Query Sequence  YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK. . . RMECPPECPPEL
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Template Sequence  . . . . . . . . . . . TAYYIAPEVLRGTYDEKCDVWSAGVILYILLS. GTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDA
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   238.240.........250.........260......... 270.........280.........290.........300.....
 
   569570.........580.........590.
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Query Sequence  YALMSDCWIYKWEDRPDFLTVEQ
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Template Sequence  KDLIRKMLTFHPSLRITATQCLE
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   306...310.........320........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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