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Job DescriptionP43403
Confidence99.95%DateThu Apr 26 09:45:10 BST 2012
Rank281Aligned Residues206
% Identity14%Templatec3en9B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:o-sialoglycoprotein endopeptidase/protein kinase; PDBTitle: structure of the methanococcus jannaschii kae1-bud32 fusion2 protein
Resolution2.67 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   321........330.........340.........350.........360.........370.........380 .........390...
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Query Sequence  DPEELKDKKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADT. . . . . . . EEMMREAQIMHQL
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Template Sequence  NGRWMSLDETKIIPNYRTDMVEVNWIGAEADIKRDSY. . . . LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALV
Template Known Secondary structure  TS

B
TGGG


TT

GGGS






S....TT


TTS
G
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   299300.........310.........320.........330..... ....340.........350.........360.........370....
 
   394.....400..... ....410.........420.........430.........440.........450.........460.........470..
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Query Sequence  DNPYIVRLIGVC. QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNR
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Template Sequence  KDFGIPAPYIFDVDLDNKRIMMSYINGKLAKDVIEDN. . . . . . . . . LDIAYKIGEIVGKLHKNDVIHNDLTTSNFIF. . D
Template Known Secondary structure  GGTT




TTTT


SGGGTTTT
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S


GGG..S
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   392.......400.........410.........420........ .430.........440.........450......... 460
 
   473......480.........490.........500.........510.........520.........530.........540.........550..
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Query Sequence  HYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFI
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Template Sequence  KDLYIIDFGLGKISNLDED. . . . . . . . KAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYD. . . . . . . . RWEIILELM
Template Known Secondary structure  SS


TT



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   461........470......... 480.........490.........500.........510..... ....520....
 
   553....
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Query Sequence  EQGKR
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Template Sequence  KDVER
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   525....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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