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Job DescriptionP43403
Confidence100.00%DateThu Apr 26 09:45:10 BST 2012
Rank167Aligned Residues235
% Identity29%Templatec3dxnA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calmodulin-like domain protein kinase isoform 3; PDBTitle: crystal structure of the calcium-dependent kinase from toxoplasma2 gondii, 541.m00134, kinase domain.
Resolution2.17 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   344.....350.........360.........370..... ....380.........390.........400..... ....410.........420
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Query Sequence  LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT. . EKADTEEMMREAQIMHQLDNPYIVRLIGVC. QAEALMLVMEMAGGG
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Template Sequence  KKLGSYGEVLLCKDK. TGA. . ERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGG
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..GGGS


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   27..30.........40. ... .....50.........60.........70.........80.........90.........100...
 
   421........430.........440.........450.........460.........470... ......480.........490........
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Query Sequence  PLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRH. . YAKISDFGLSKALGADDSYYTARSA
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Template Sequence  ELFDEIILRQK. FSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSDALIKIVDFGLSA. . . . . . . . . . . HFE
Template Known Secondary structure  BSS.

TTT


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GGGSS





STT
TT...........T

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   107..110....... ..120.........130.........140.........150.........160.........170. ...
 
   499500.........510.........520.........530.........540.........550...... ...560.........570.....
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Query Sequence  GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK. . . RMECPPECPPELYALMSDC
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Template Sequence  RLGTAYYIAPEVLR. KKYDEKCDVWSCGVILYILLC. GYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLM
Template Known Secondary structure  TTT
TTT

T.T


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   183......190...... ...200.........210....... ..220.........230.........240.........250.........260
 
   576...580.........590........
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Query Sequence  WIYKWEDRPDFLTVEQRMRACYY
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Template Sequence  LTYEPSKRISAEEA. . . LNHPWI
Template Known Secondary structure  T
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TTTS

...TS
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   261........270.... .....280
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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