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Job DescriptionP43403
Confidence100.00%DateThu Apr 26 09:45:10 BST 2012
Rank77Aligned Residues249
% Identity26%Templatec3dfaA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium-dependent protein kinase cgd3_920; PDBTitle: crystal structure of kinase domain of calcium-dependent protein kinase2 cgd3_920 from cryptosporidium parvum
Resolution2.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   336...340.........350.........360.........370..... ....380.........390.........400..... ....410...
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Query Sequence  NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT. EKADTEEMMREAQIMHQLDNPYIVRLIGVC. QAEALMLV
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Template Sequence  ERYNIVCMLGKGSFGEVLKCKDRITQQ. . EYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV
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SSSTTT

..GGGBS
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   5....10.........20.........30. ........40.........50.........60.........70.........80..
 
   414.....420.........430.........440.........450.........460.........470.........480.........490...
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Query Sequence  MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYY
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Template Sequence  GELYTGELFDEIIKRK. . RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLK. DCDIKIIDFGLSTCFQQN. . . .
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   83......90........ .100.........110.........120.........130....... ..140.........150.....
 
   494.....500.........510.........520.........530.........540.........550.........560. ........570
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Query Sequence  TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECP. . . PECPPELYA
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Template Sequence  TKMKDRIGTAYYIAPEVLR. GTYDEKCDVWSAGVILYILLS. GTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKD
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   161........170......... 180.........190.........200 .........210.........220.........230........
 
   571........580.........590........
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Query Sequence  LMSDCWIYKWEDRPDFLTVEQRMRACYY
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Template Sequence  LIRKMLTFHPSLRITATQC. . . LEHPWI
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   239240.........250....... ..260...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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