Job Description P43403 Confidence 96.71% Date Thu Apr 26 09:45:10 BST 2012 Rank 398 Aligned Residues 117 % Identity 29% Template c3csvA_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminoglycoside phosphotransferase; PDBTitle: crystal structure of a putative aminoglycoside phosphotransferase2 (yp_614837.1) from silicibacter sp. tm1040 at 2.15 a resolution Resolution 2.15 Å

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		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	I	K	V	L	K	Q	G	T	E	K	A	D	T	E	E	M	M	R	E	A	Q	I	M	H	Q	L	D	N	P	Y	I	V	R	L	I	G	V	C	Q	A	E	A	L	M	L	V	M	E	M	A	G	G	G	P	L	H	K	F	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.													.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.													.
Template Sequence		A	V	L	X	D	W	S	P	E	E	G	G	D	T	Q	P	F	V	D	L	A	Q	Y	L	R	N	L	D	I	S	.	A	P	E	I	Y	A	E	E	H	A	R	G	.	L	L	L	I	E	D	L	G	D	A	L	F	T	E	V	I	N	N	D	P	A	Q	E	X	P	L	Y	R	A	A	V	D	L	L	I	H
Template Known Secondary structure									T	T	T	T			S													T	T		B	.									T	T	T	T	.									S		B									G	G	G
Template Predicted Secondary structure																																.													.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
																															427	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.			.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.																				.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.																				.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	K	R	E	E	I	P	V	S	N	V	A	E	L	L	H	Q	V	S	M	G	M	K	Y	L	E	E	K	.	.	N	F	V	H	R	D	L	A	A	R	N	V	L	L	V	N	R	H	Y	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.																				.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.																				.
Template Conservation
Template Sequence		L	H	D	A	Q	T	P	E	L	A	R	L	D	P	E	T	L	S	E	X	T	R	L	A	F	S	E	Y	R	Y	A	I	L	G	D	A	A	E	D	N	R	K	R	F	E	H	R	F	A	Q	I	L	S	A	Q	L	E	G	D	X	V	F	V	H	R	D	F	H	A	Q	N	L	L	W	L	P	E	R	E	G
Template Known Secondary structure				T	S							B									T	T	T					T							S	S																							S							S			S	G	G	G					T	T	S		G
Template Predicted Secondary structure
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
					475	.	.	.	.	480	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	A	K	I	S	D	F	G	L	S	K	A
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		L	A	R	V	G	V	I	D	F	Q	D	A	K	L
Template Known Secondary structure		G	G	G							T	T
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions