Job Description P43403 Confidence 100.00% Date Thu Apr 26 09:45:10 BST 2012 Rank 123 Aligned Residues 256 % Identity 23% Template c3c0hB_ PDB info PDB header:transferase Chain: B: PDB Molecule:peripheral plasma membrane protein cask; PDBTitle: cask cam-kinase domain- amppnp complex, p1 form Resolution 2.30 Å

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		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.					.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.		.	.	.	.
Predicted Secondary structure																																										.	.	.	.																																.
Query SS confidence																																										.	.	.	.																																.
Query Sequence		D	N	L	L	I	A	D	I	E	L	G	C	G	N	F	G	S	V	R	Q	G	V	Y	R	M	R	K	K	Q	I	D	V	A	I	K	V	L	K	Q	G	.	.	.	.	T	E	K	A	D	T	E	E	M	M	R	E	A	Q	I	M	H	Q	L	D	N	P	Y	I	V	R	L	I	G	V	C	.	Q	A	E	A
Query Conservation																																										.	.	.	.																																.
Alig confidence																														.	.											.	.	.	.																																.
Template Conservation																														.	.
Template Sequence		E	D	V	Y	E	L	C	E	V	I	G	K	G	P	F	S	V	V	R	R	C	I	N	R	E	T	G	Q	.	.	Q	F	A	V	K	I	V	D	V	A	K	F	T	S	S	P	G	L	S	T	E	D	L	K	R	E	A	S	I	C	H	M	L	K	H	P	H	I	V	E	L	L	E	T	Y	S	S	D	G	M
Template Known Secondary structure															S	S									T	T	T			.	.														T	S	T	T																			T	T	B										T	T
Template Predicted Secondary structure																														.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.			.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.				430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470				.	.	.	.	.	.	.	.	.	480	.	.	.
Predicted Secondary structure																						.	.	.																																										.	.	.
Query SS confidence																						.	.	.																																										.	.	.
Query Sequence		L	M	L	V	M	E	M	A	G	G	G	P	L	H	K	F	L	V	G	K	.	.	.	R	E	E	I	P	V	S	N	V	A	E	L	L	H	Q	V	S	M	G	M	K	Y	L	E	E	K	N	F	V	H	R	D	L	A	A	R	N	V	L	L	V	.	.	.	N	R	H	Y	A	K	I	S	D	F	G	L	S
Query Conservation																						.	.	.																																										.	.	.
Alig confidence																						.	.	.																																										.	.	.
Template Conservation
Template Sequence		L	Y	M	V	F	E	F	M	D	G	A	D	L	C	F	E	I	V	K	R	A	D	A	G	F	V	Y	S	E	A	V	A	S	H	Y	M	R	Q	I	L	E	A	L	R	Y	C	H	D	N	N	I	I	H	R	D	V	K	P	H	C	V	L	L	A	S	K	E	N	S	A	P	V	K	L	G	G	F	G	V	A
Template Known Secondary structure											S		B											T	T																									T	T				S				G	G	G				S	S	S	S	T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		484	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560			.
Predicted Secondary structure																																																																															.	.
Query SS confidence																																																																															.	.
Query Sequence		K	A	L	G	A	D	D	S	Y	Y	T	A	R	S	A	G	K	W	P	L	K	W	Y	A	P	E	C	I	N	F	R	K	F	S	S	R	S	D	V	W	S	Y	G	V	T	M	W	E	A	L	S	Y	G	Q	K	P	Y	K	K	M	K	G	P	E	V	M	A	F	I	E	Q	G	K	R	M	E	C	.	.	P
Query Conservation																																																																															.	.
Alig confidence									.	.	.																																										.																										.	.
Template Conservation									.	.	.																																										.
Template Sequence		I	Q	L	G	E	S	G	.	.	.	L	V	A	G	G	R	V	G	T	P	H	F	M	A	P	E	V	V	K	R	E	P	Y	G	K	P	V	D	V	W	G	C	G	V	I	L	F	I	L	L	S	.	G	C	L	P	F	Y	G	T	K	E	R	L	F	E	G	I	I	K	G	K	Y	K	M	N	P	R	Q	W
Template Known Secondary structure						T	T	S	.	.	.		B						S		G	G	G							T	T			B		T																	.	S	S		S	S		S	S											T
Template Predicted Secondary structure									.	.	.																																										.
Template SS confidence
		167	.	.	170	.	.	.				.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		562	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	C	P	P	E	L	Y	A	L	M	S	D	C	W	I	Y	K	W	E	D	R	P	D	F	L	T	V	E	Q	R	M	R	A	C	Y	Y	S
Query Conservation
Alig confidence																														.	.	.
Template Conservation																														.	.	.
Template Sequence		S	H	I	S	E	S	A	K	D	L	V	R	R	M	L	M	L	D	P	A	E	R	I	T	V	Y	E	A	.	.	.	L	N	H	P	W	L	K
Template Known Secondary structure		T	T	S												T		S	S	T	T	T	S							.	.	.		T	S
Template Predicted Secondary structure																														.	.	.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270				.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions