Return to main results Retrieve Phyre Job Id

Job DescriptionP43403
Confidence98.03%DateThu Apr 26 09:45:10 BST 2012
Rank377Aligned Residues72
% Identity18%Templatec3bunB_
PDB info PDB header:ligase/signaling proteinChain: B: PDB Molecule:e3 ubiquitin-protein ligase cbl; PDBTitle: crystal structure of c-cbl-tkb domain complexed with its2 binding motif in sprouty4
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50... ......60.........70.....
Predicted Secondary structure 
























...........









Query SS confidence 














































. . . . . . . . . . .





















Query Sequence  HLPFFYGSISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVHD. . . . . . . . . . . VRFHHFPIERQLNGTYAIAGGK
Query Conservation     



 


  
   
   
  

 



 
    
 
 

    ...........    
  
     
        
Alig confidence 














































...........





















Template Conservation   



 








  
     







 












   
 
 



 

 
 



 
   
 

 
 
 
Template Sequence  THPGYMAFLTYDEVKARLQKFIHKPGSYIFRLSCTRLGQWAIGYVTADGNILQTIPHNKPLFQALIDGFREGFYLFPDGR
Template Known Secondary structure  S
TTB
TT

TTTTSTT
SSSTTS
TTS



SS
TTSS
TT
Template Predicted Secondary structure 



































Template SS confidence 















































































   264.....270.........280.........290.........300.........310.........320.........330.........340...
 
   76..
Predicted Secondary structure 


Query SS confidence 


Query Sequence  AHC
Query Conservation   
 
Alig confidence 


Template Conservation    
Template Sequence  NQN
Template Known Secondary structure  S

Template Predicted Secondary structure 


Template SS confidence 


   344..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions