Job Description P43403 Confidence 100.00% Date Thu Apr 26 09:45:10 BST 2012 Rank 198 Aligned Residues 240 % Identity 26% Template c3a60B_ PDB info PDB header:transferase Chain: B: PDB Molecule:ribosomal protein s6 kinase beta-1; PDBTitle: crystal structure of unphosphorylated p70s6k1 (form i) Resolution 2.80 Å

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		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.		.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.		.	.	.	410
Predicted Secondary structure																												.																																																	.
Query SS confidence																												.																																																	.
Query Sequence		K	R	D	N	L	L	I	A	D	I	E	L	G	C	G	N	F	G	S	V	R	Q	G	V	Y	R	.	M	R	K	K	Q	I	D	V	A	I	K	V	L	K	Q	G	T	E	K	A	D	T	E	E	M	M	R	E	A	Q	I	M	H	Q	L	D	N	P	Y	I	V	R	L	I	G	V	C	Q	.	A	E	A	L
Query Conservation																												.																																																	.
Alig confidence																												.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	R	P	E	C	F	E	L	L	R	V	L	G	K	G	G	Y	G	K	V	F	Q	V	R	K	V	T	G	A	N	T	G	K	I	F	A	M	K	V	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	K	H	P	F	I	V	D	L	I	Y	A	F	Q	T	G	G	K	L
Template Known Secondary structure				G	G	G											S	S	S									S	S	T	T	T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	B										S	S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.																					.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	V	M	E	M	A	G	G	G	P	L	H	K	F	L	V	G	K	R	E	E	I	P	V	S	N	V	A	E	L	L	H	Q	V	S	M	G	M	K	Y	L	E	E	K	N	F	V	H	R	D	L	A	A	R	N	V	L	L	V	N	R	H	Y	A	K	I	S	D	F	G	L	S	K	A	L	G	A	D	D
Query Conservation
Alig confidence																							.
Template Conservation																							.
Template Sequence		Y	L	I	L	E	Y	L	S	G	G	E	L	F	M	Q	L	E	R	E	G	I	.	F	M	E	D	T	A	C	F	Y	L	A	E	I	S	M	A	L	G	H	L	H	Q	K	G	I	I	Y	R	D	L	K	P	E	N	I	M	L	N	H	Q	G	H	V	K	L	T	D	F	G	L	C	K	E	S	C	G	T	I
Template Known Secondary structure									T	T	T	T	S								T		.																							T	T				S				G	G	G					T	T					B				T	T
Template Predicted Secondary structure																							.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		491	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Y	Y	T	A	R	S	A	G	K	W	P	L	K	W	Y	A	P	E	C	I	N	F	R	K	F	S	S	R	S	D	V	W	S	Y	G	V	T	M	W	E	A	L	S	Y	G	Q	K	P	Y	K	K	M	K	G	P	E	V	M	A	F	I	E	Q	G	K	R	M	E	C	P	P	E	C	P	P	E	L	Y	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																.																						.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																.																						.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	E	Y	M	A	P	E	I	L	M	R	S	G	H	N	R	A	V	D	W	W	S	L	G	A	L	M	Y	D	M	L	T	.	G	A	P	P	F	T	G	E	N	R	K	K	T	I	D	K	I	L	K	C	K	.	L	N	L	P	P	Y	L	T	Q	E	A	R	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S						T	T	T	T	S	S	T																	.	S	S		T	T			S	S													.					S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																.																						.
Template SS confidence
															258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.		.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.		310	.	.	.	.	.	.	.	.	.	320	.	.
		571	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.			.	590	.	.	.	.	.	.	.	.							.	600	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.											.	.	.	.	.	.
Query SS confidence																				.	.											.	.	.	.	.	.
Query Sequence		L	M	S	D	C	W	I	Y	K	W	E	D	R	P	D	F	L	T	.	.	V	E	Q	R	M	R	A	C	Y	Y	.	.	.	.	.	.	S	L	A	S	K	V	E	G	P	P
Query Conservation																				.	.											.	.	.	.	.	.
Alig confidence																				.	.											.	.	.	.	.	.
Template Conservation
Template Sequence		L	L	K	K	L	L	K	R	N	A	A	S	R	L	G	A	G	P	G	D	A	G	E	V	Q	A	H	P	F	F	R	H	I	N	W	E	E	L	L	A	R	K	V	E	P	P
Template Known Secondary structure							S		S		T	T	T	S	T	T		S	T	T	T						T	S	G	G	G	T	T								T	T		S			S
Template Predicted Secondary structure
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions