Job Description P43403 Confidence 100.00% Date Thu Apr 26 09:45:10 BST 2012 Rank 103 Aligned Residues 245 % Identity 17% Template c2wtkB_ PDB info PDB header:transferase/metal-binding protein Chain: B: PDB Molecule:ste20-related kinase adapter protein alpha; PDBTitle: structure of the heterotrimeric lkb1-stradalpha-mo25alpha2 complex Resolution 2.65 Å

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		337	.	.	340	.	.	.	.	.	.	.			.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.		.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.		.	.	.	.	410	.	.
Predicted Secondary structure													.	.																													.																															.
Query SS confidence													.	.																													.																															.
Query Sequence		L	L	I	A	D	I	E	L	G	C	G	.	.	N	F	G	S	V	R	Q	G	V	Y	R	M	R	K	K	Q	I	D	V	A	I	K	V	L	K	Q	G	T	.	E	K	A	D	T	E	E	M	M	R	E	A	Q	I	M	H	Q	L	D	N	P	Y	I	V	R	L	I	G	V	C	.	Q	A	E	A	L	M	L
Query Conservation													.	.																													.																															.
Alig confidence													.	.																.	.												.																															.
Template Conservation																														.	.
Template Sequence		C	Y	E	L	L	T	V	I	G	K	G	F	E	D	L	M	T	V	N	L	A	R	Y	K	P	T	G	E	.	.	Y	V	T	V	R	R	I	N	L	E	A	C	S	N	E	M	V	T	F	L	Q	G	E	L	H	V	S	K	L	F	N	H	P	N	I	V	P	Y	R	A	T	F	I	A	D	N	E	L	W	V
Template Known Secondary structure		G											T	T	T	T									T	T	T			.	.									T	T	S	S																					T	T	B										S	S
Template Predicted Secondary structure																														.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.			.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.		.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.
Predicted Secondary structure																						.																																																								.	.	.	.
Query SS confidence																						.																																																								.	.	.	.
Query Sequence		V	M	E	M	A	G	G	G	P	L	H	K	F	L	V	G	K	R	E	E	.	I	P	V	S	N	V	A	E	L	L	H	Q	V	S	M	G	M	K	Y	L	E	E	K	N	F	V	H	R	D	L	A	A	R	N	V	L	L	V	N	R	H	Y	A	K	I	S	D	F	G	L	S	K	A	L	G	.	.	.	.
Query Conservation																						.																																																								.	.	.	.
Alig confidence																						.																																																								.	.	.	.
Template Conservation
Template Sequence		V	T	S	F	M	A	Y	G	S	A	K	D	L	I	C	T	H	F	M	D	G	M	N	E	L	A	I	A	Y	I	L	Q	G	V	L	K	A	L	D	Y	I	H	H	M	G	Y	V	H	R	S	V	K	A	S	H	I	L	I	S	V	D	G	K	V	Y	L	S	G	L	R	S	N	L	S	M	I	S	H	G	Q
Template Known Secondary structure							T	T										T		T	T																								T	T							S	G	G	G					T	T								G	G	G							T	T
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		488	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.			.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.
Predicted Secondary structure																													.	.
Query SS confidence																													.	.
Query Sequence		A	D	D	S	Y	Y	T	A	R	S	A	G	K	W	P	L	K	W	Y	A	P	E	C	I	N	F	R	.	.	K	F	S	S	R	S	D	V	W	S	Y	G	V	T	M	W	E	A	L	S	Y	G	Q	K	P	Y	K	K	M	K	G	P	E	V	M	A	F	I	E	Q	G	K	R	M	E	C	P	P	E	C	P
Query Conservation																													.	.
Alig confidence																													.	.																					.																		.	.	.	.	.	.	.
Template Conservation																																																			.																		.	.	.	.	.	.	.
Template Sequence		R	Q	R	V	V	H	D	F	P	K	Y	S	V	K	V	L	P	W	L	S	P	E	V	L	Q	Q	N	L	Q	G	Y	D	A	K	S	D	I	Y	S	V	G	I	T	A	C	E	L	A	N	.	G	H	V	P	F	D	M	P	A	T	Q	M	L	L	E	K	L	.	.	.	.	.	.	.	V	P	C	L	F	S
Template Known Secondary structure				S		B					S	S		G	G	G	G	G	G	S						S			T	T		B		T																	.	S	S													T	T		.	.	.	.	.	.	.
Template Predicted Secondary structure																																																			.																		.	.	.	.	.	.	.
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.		.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.								.	.	.	.	.	.
		566	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	L	Y	A	L	M	S	D	C	W	I	Y	K	W	E	D	R	P	D	F	L	T	V	E	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	H	F	H	H	F	V	E	Q	C	L	Q	R	N	P	D	A	R	P	S	A	S	T	L	L	N
Template Known Secondary structure												T		S	S	G	G	G	S								T
Template Predicted Secondary structure
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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