Job Description P43403 Confidence 100.00% Date Thu Apr 26 09:45:10 BST 2012 Rank 248 Aligned Residues 251 % Identity 20% Template c2vagA_ PDB info PDB header:transferase Chain: A: PDB Molecule:dual specificity protein kinase clk1; PDBTitle: crystal structure of di-phosphorylated human clk1 in2 complex with a novel substituted indole inhibitor Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.								.	.
Predicted Secondary structure																																																																									.	.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.	.
Query Sequence		D	N	L	L	I	A	D	I	E	L	G	C	G	N	F	G	S	V	R	Q	G	V	Y	R	M	R	K	K	Q	I	D	V	A	I	K	V	L	K	Q	G	T	E	K	A	D	T	E	E	M	M	R	E	A	Q	I	M	H	Q	L	D	N	P	Y	I	V	R	L	I	G	V	C	.	.	.	.	.	.	.	Q	A
Query Conservation																																																																									.	.	.	.	.	.	.
Alig confidence																																.								.	.																																.	.	.	.	.	.	.
Template Conservation																																.								.	.
Template Sequence		S	A	R	Y	E	I	V	D	T	L	G	E	G	A	F	G	K	V	V	E	C	I	D	H	K	A	G	G	R	H	.	V	A	V	K	I	V	K	.	.	N	V	D	R	Y	C	E	A	A	R	S	E	I	Q	V	L	E	H	L	N	T	T	D	P	N	S	T	F	R	C	V	Q	M	L	E	W	F	E	H	H
Template Known Secondary structure		T	T	T											T	T									T	T	T	T	T			.								.	.	S	S																						T	T		T	T		B										T
Template Predicted Secondary structure																																.								.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	L	M	L	V	M	E	M	A	G	G	G	P	L	H	K	F	L	V	G	K	R	E	E	I	P	V	S	N	V	A	E	L	L	H	Q	V	S	M	G	M	K	Y	L	E	E	K	N	F	V	H	R	D	L	A	A	R	N	V	L	L	V	N	R	H	Y	A	K	I	S	D	F	G	L	S	K	A	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	H	I	C	I	V	F	E	L	L	G	L	S	T	Y	D	F	I	K	E	N	G	F	L	P	F	R	L	D	H	I	R	K	M	A	Y	Q	I	C	K	S	V	N	F	L	H	S	N	K	L	T	H	T	D	L	K	P	E	N	I	L	F	V	Q	S	D	Y	T	E	A	Y	N	K	R	D	E	R	T	L	I
Template Known Secondary structure		T												B								T	T	T																									T	T								G	G	G				S																	S
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		488	.									490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.																																																																		.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.																																																																		.	.	.	.	.
Query Sequence		A	D	.	.	.	.	.	.	.	.	D	S	Y	Y	T	A	R	S	A	G	K	W	P	L	K	W	Y	A	P	E	C	I	N	F	R	K	F	S	S	R	S	D	V	W	S	Y	G	V	T	M	W	E	A	L	S	Y	G	Q	K	P	Y	K	K	M	K	G	P	E	V	M	A	F	I	E	Q	.	.	.	.	.
Query Conservation				.	.	.	.	.	.	.	.																																																																		.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.																																														.																				.	.	.	.	.
Template Conservation																																																									.
Template Sequence		N	P	D	I	K	V	V	D	F	G	S	A	T	Y	D	D	E	H	H	S	T	L	V	R	H	Y	R	A	P	E	V	I	L	A	L	G	W	S	Q	P	C	D	V	W	S	I	G	C	I	L	I	E	Y	Y	L	.	G	F	T	V	F	P	T	H	D	S	K	E	H	L	A	M	M	E	R	I	L	G	P	L
Template Known Secondary structure											S	S				T	T	S				S					S							T	T	S			S	T																	.	S	S		S				S															S
Template Predicted Secondary structure																																																									.
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.		.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
																																								555	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	R	M	E	C	P	P	E	C	P	P	E	L	Y	A	L	M	S	D	C	W	I	Y	K	W	E	D	R	P	D	F	L	T	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	K	H	M	I	Q	K	T	R	K	R	K	Y	F	H	H	D	R	L	D	W	D	E	H	S	S	A	G	R	Y	V	S	R	A	C	K	P	L	K	E	F	M	L	S	Q	D	V	E	H	E	R	L	F	D	L	I	Q	K	M	L	E	Y	D	P	A	K	R	I	T	L	R	E	A
Template Known Secondary structure										S		G	G	G			T	T						T	T	S													G	G	G	G		S			S														T		S	S	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions