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Job DescriptionP43403
Confidence100.00%DateThu Apr 26 09:45:10 BST 2012
Rank78Aligned Residues252
% Identity24%Templatec2qg5D_
PDB info PDB header:transferaseChain: D: PDB Molecule:calcium/calmodulin-dependent protein kinase; PDBTitle: cryptosporidium parvum calcium dependent protein kinase cgd7_1840
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   335....340.........350.........360.........370.........380.........390.........400..... ....410...
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Query Sequence  DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC. QAEALMLV
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Template Sequence  NQYYTLENTIGRGSWGEVKIAVQKGTRI. . RRAAKKIPKYFVED. VDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLV
Template Known Secondary structure  TTTTT

..TTT
S
.TT

BTTB


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   25....30.........40.........50.. .......60...... ...70.........80.........90.........100.
 
   414.....420.........430.........440.........450.........460......... 470.........480.........490
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Query Sequence  MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLL. . . VNRHYAKISDFGLSKALGADD
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Template Sequence  MELCTGGELFERVVHKRV. FRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG.
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SGGGGGTTTSS.

TT



SGGGSSSSTT




TT


TT.
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   102.......110......... 120.........130.........140.........150.........160.........170.........
 
   491........500.........510.........520.........530.........540.........550.........560. .......
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Query Sequence  SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECP. . PECPPEL
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Template Sequence  . . . KMMRTKVGTPYYVSPQVLEGL. YGPECDEWSAGVMMYVLLC. GYPPFSAPTDEVMLKIREGTFTFPEKDWLNVSPQA
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B



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   180.........190.........200 .........210......... 220.........230.........240.........250....
 
   569570.........580.........590.........
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Query Sequence  YALMSDCWIYKWEDRPDFLTVEQRMRACYYS
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Template Sequence  ESLIRRLLTKSPKQRITSLQA. . . LEHEWFE
Template Known Secondary structure  S
SSTTTS

...TTS
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   256...260.........270...... ...280...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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