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Job DescriptionP43403
Confidence99.89%DateThu Apr 26 09:45:10 BST 2012
Rank323Aligned Residues110
% Identity29%Templatec2crhA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:vav proto-oncogene; PDBTitle: solution structure of the sh2 domain of human proto-2 oncogene protein vav1
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  PDPAAHLPFFYGSISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQLNGTYAIAGGKAHCGPA
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Template Sequence  PQDLSVHLWYAGPMERAGAESILANR. . SDGTFLVRQRVKDAAEFAISIKYNVEVKHIKIMTA. EGLYRITEKKAFRGLT
Template Known Secondary structure  SS
GGGSSSB

S

TTTS..
TT

SSTT


TT
.TTSSTT

BSS
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   20.........30.........40..... ....50.........60.........70.........80 .........90......
 
   82.......90. ........100.........110....
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Query Sequence  ELCEFYSRDP. . . . . DGLPCNLRKPCNRPSGLEPQPGV
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Template Sequence  ELVEFYQQNSLKDCFKSLDTTLQFPFKEPEKRTISRSG
Template Known Secondary structure  TTS
GGGT
TT





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SS


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   97..100.........110.........120.........130....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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