Return to main results Retrieve Phyre Job Id

Job DescriptionP43403
Confidence100.00%DateThu Apr 26 09:45:10 BST 2012
Rank96Aligned Residues246
% Identity24%Templatec2cgvA_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase chk1; PDBTitle: identification of chemically diverse chk1 inhibitors by2 receptor-based virtual screening
Resolution2.6 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   336...340.........350.........360.........370.........380.........390.........400..... ....410....
Predicted Secondary structure 




















.


Query SS confidence 





































































.








Query Sequence  NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC. QAEALMLVM
Query Conservation          

 
 

 
             



 
              
  

  
 




 
 
  .      

 
Alig confidence 


























..












...
























.








Template Conservation    
     

 
 

 
          .. 



 
      ...     
   
  
 




              
 
Template Sequence  EDWDLVQTLGEGAYGEVQLAVNRVTEE. . AVAVKIVDMKRCP. . . ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL
Template Known Secondary structure 
S



SSTTT

..TT


...


TTB


STT
Template Predicted Secondary structure 









.....










Template SS confidence 















































































   7..10.........20.........30... ......40...... ...50.........60.........70.........80.
 
   415....420.........430.........440.........450.........460.........470.........480.........490....
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  EMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYT
Query Conservation 
    


   
                 


 

 


   






  



     


 




           
Alig confidence 











.


































































Template Conservation 
      
    .             
          
             

        

 


 
           
Template Sequence  EYCSGGELFDRI. EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL
Template Known Secondary structure 


TTGGGGS.BTTTB

TT
S

SGGG
TT




TT

TT

Template Predicted Secondary structure 








.
















































Template SS confidence 















































































   85....90...... ...100.........110.........120.........130.........140.........150.........160...
 
   495....500.........510...... ...520.........530.........540... ......550.........560.........570.
Predicted Secondary structure 











.









..












Query SS confidence 





















.


























. .



























Query Sequence  ARSAGKWPLKWYAPECINFRKF. SSRSDVWSYGVTMWEALSYGQKPYKKM. . KGPEVMAFIEQGKRMECPPECPPELYAL
Query Conservation         
    


 
     .
  







 
 
  
 
  
    ..        
    
   
   
     
Alig confidence 







.












.

















.







..



























Template Conservation          .    

            





  



  .
  

                          
     
Template Sequence  LNKMCGTL. PYVAPELLKRREFHAEPVDVWSCGIVLTAMLA. GELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL
Template Known Secondary structure  B
S

S
G.GGS

SSB
.SS
S
SS

TT
TT
TTSTTGGGT
Template Predicted Secondary structure 







.














.





















Template SS confidence 















































































   164.....170. ........180.........190.........200... ......210.........220.........230.........240.
 
   572.......580.........
Predicted Secondary structure 






Query SS confidence 

















Query Sequence  MSDCWIYKWEDRPDFLTV
Query Conservation     
    
  


   
Alig confidence 

















Template Conservation 
   
  

  
 
  

Template Sequence  LHKILVENPSARITIPDI
Template Known Secondary structure  S
SSTTTS

Template Predicted Secondary structure 






Template SS confidence 

















   242.......250.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions